9 homologs were found in PanDaTox collection
for query gene Hhal_1297 on replicon NC_008789
Organism: Halorhodospira halophila SL1



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008789  Hhal_1297  hypothetical protein  100 
 
 
93 aa  190  5e-48  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_2579  hypothetical protein  44.07 
 
 
68 aa  47  0.00009  Delftia acidovorans SPH-1  Bacteria  hitchhiker  0.00556103  hitchhiker  0.0000472514 
 
 
-
 
NC_010002  Daci_2613  hypothetical protein  44.07 
 
 
68 aa  47  0.00009  Delftia acidovorans SPH-1  Bacteria  hitchhiker  0.0031562  hitchhiker  0.0000000000000109631 
 
 
-
 
NC_007777  Francci3_3400  excisionase/Xis, DNA-binding  46.3 
 
 
67 aa  46.6  0.0001  Frankia sp. CcI3  Bacteria  normal  0.149044  normal  0.941733 
 
 
-
 
NC_013530  Xcel_1568  phage transcriptional regulator, AlpA  38.71 
 
 
78 aa  46.6  0.0001  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_1426  hypothetical protein  38.89 
 
 
84 aa  41.6  0.004  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_013730  Slin_1969  hypothetical protein  39.66 
 
 
74 aa  40.8  0.006  Spirosoma linguale DSM 74  Bacteria  normal  0.0541344  normal  0.0914739 
 
 
-
 
NC_013889  TK90_1229  phage transcriptional regulator, AlpA  40 
 
 
80 aa  40.4  0.008  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.470338  normal  0.459813 
 
 
-
 
NC_003912  CJE1419  DNA binding protein, putative  32.73 
 
 
68 aa  40  0.01  Campylobacter jejuni RM1221  Bacteria  normal  0.226949  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>