12 homologs were found in PanDaTox collection
for query gene HMPREF0424_1274 on replicon NC_013721
Organism: Gardnerella vaginalis 409-05



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013721  HMPREF0424_1274  PAP2 family protein  100 
 
 
435 aa  874    Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.594886 
 
 
-
 
NC_010816  BLD_1277  membrane-associated phospholipid phosphatase  43.44 
 
 
321 aa  233  6e-60  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_3155  phosphoesterase, PA-phosphatase related  35.96 
 
 
306 aa  64.3  0.000000004  Arthrobacter sp. FB24  Bacteria  normal  0.137243  n/a   
 
 
-
 
NC_013174  Jden_2198  phosphoesterase PA-phosphatase related  29.89 
 
 
300 aa  63.9  0.000000005  Jonesia denitrificans DSM 20603  Bacteria  normal  0.562341  normal 
 
 
-
 
NC_013530  Xcel_0343  phosphoesterase PA-phosphatase related protein  30.63 
 
 
306 aa  60.8  0.00000005  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_2841  phosphoesterase PA-phosphatase related  28.44 
 
 
302 aa  58.5  0.0000002  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.540641 
 
 
-
 
NC_013521  Sked_32690  PAP2 superfamily protein  32.3 
 
 
306 aa  58.9  0.0000002  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.468775 
 
 
-
 
NC_013441  Gbro_0374  phosphoesterase PA-phosphatase related protein  43.08 
 
 
261 aa  48.5  0.0002  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_3805  phosphoesterase PA-phosphatase related protein  35.45 
 
 
284 aa  46.2  0.001  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_012803  Mlut_17780  PAP2 superfamily protein  29.58 
 
 
286 aa  45.1  0.002  Micrococcus luteus NCTC 2665  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_1342  phosphoesterase, PA-phosphatase related  29.44 
 
 
305 aa  44.7  0.004  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_2919  phosphoesterase, PA-phosphatase related  24.9 
 
 
293 aa  44.7  0.004  Salinispora tropica CNB-440  Bacteria  normal  0.916002  normal 
 
 
-
 
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