7 homologs were found in PanDaTox collection
for query gene Gbem_0220 on replicon NC_011146
Organism: Geobacter bemidjiensis Bem



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011146  Gbem_0220  hypothetical protein  100 
 
 
167 aa  332  1e-90  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0203  hypothetical protein  93.33 
 
 
167 aa  293  9e-79  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.000000000296609 
 
 
-
 
NC_009483  Gura_0392  hypothetical protein  41.14 
 
 
170 aa  109  2.0000000000000002e-23  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2821  hypothetical protein  38.13 
 
 
169 aa  66.6  0.0000000001  Rhodoferax ferrireducens T118  Bacteria  normal  0.193377  n/a   
 
 
-
 
NC_008765  Ajs_4216  hypothetical protein  39.05 
 
 
166 aa  55.8  0.0000003  Acidovorax sp. JS42  Bacteria  normal  0.150623  normal 
 
 
-
 
NC_008826  Mpe_B0289  hypothetical protein  39.81 
 
 
179 aa  48.9  0.00003  Methylibium petroleiphilum PM1  Bacteria  normal  0.158025  normal  0.0408421 
 
 
-
 
NC_011761  AFE_1060  hypothetical protein  38.16 
 
 
164 aa  44.7  0.0007  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
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