5 homologs were found in PanDaTox collection
for query gene GSU3452 on replicon NC_002939
Organism: Geobacter sulfurreducens PCA



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_002939  GSU3452  hypothetical protein  100 
 
 
43 aa  88.2  4e-17  Geobacter sulfurreducens PCA  Bacteria  normal  0.407738  n/a   
 
 
-
 
NC_007517  Gmet_0017  SlyX  69.77 
 
 
67 aa  62.4  0.000000002  Geobacter metallireducens GS-15  Bacteria  normal  0.643938  normal 
 
 
-
 
NC_012918  GM21_1717  SlyX family protein  48.84 
 
 
67 aa  43.1  0.001  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00000000834662 
 
 
-
 
NC_011146  Gbem_2502  SlyX family protein  48.84 
 
 
67 aa  42.7  0.002  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_1436  SlyX family protein  44.19 
 
 
67 aa  40.4  0.007  Geobacter uraniireducens Rf4  Bacteria  normal  0.423853  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>