5 homologs were found in PanDaTox collection
for query gene EcSMS35_B0007 on replicon NC_010485
Organism: Escherichia coli SMS-3-5



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010485  EcSMS35_B0007  colicin-E1 protein  100 
 
 
521 aa  1055    Escherichia coli SMS-3-5  Bacteria  normal  0.542919  n/a   
 
 
-
 
NC_011081  SeHA_A0017  colicin Ib protein  31.85 
 
 
626 aa  132  2.0000000000000002e-29  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.249038  normal 
 
 
-
 
NC_008463  PA14_59220  pyocin S5  30.6 
 
 
498 aa  123  9e-27  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  hitchhiker  0.000328574  hitchhiker  0.000141221 
 
 
-
 
NC_009436  Ent638_2214  hypothetical protein  29.31 
 
 
427 aa  57.4  0.0000006  Enterobacter sp. 638  Bacteria  normal  normal  0.0650836 
 
 
-
 
NC_009436  Ent638_2579  hypothetical protein  30.06 
 
 
441 aa  55.8  0.000002  Enterobacter sp. 638  Bacteria  normal  normal  0.0330317 
 
 
-
 
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