8 homologs were found in PanDaTox collection
for query gene Dvul_2738 on replicon NC_008751
Organism: Desulfovibrio vulgaris DP4



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008751  Dvul_2738  type IV pilus assembly PilZ  100 
 
 
135 aa  283  5.999999999999999e-76  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.130653 
 
 
-
 
NC_007519  Dde_0203  hypothetical protein  55.64 
 
 
134 aa  172  9.999999999999999e-43  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_2226  type IV pilus assembly PilZ  63.49 
 
 
132 aa  170  6.999999999999999e-42  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_002947  PP_2164  type IV pilus assembly PilZ  31.25 
 
 
99 aa  45.1  0.0003  Pseudomonas putida KT2440  Bacteria  normal  0.0370021  normal  0.992287 
 
 
-
 
NC_010322  PputGB1_1705  type IV pilus assembly PilZ  31.25 
 
 
99 aa  45.1  0.0003  Pseudomonas putida GB-1  Bacteria  normal  hitchhiker  0.00105671 
 
 
-
 
NC_009512  Pput_3578  type IV pilus assembly PilZ  31.25 
 
 
99 aa  43.9  0.0008  Pseudomonas putida F1  Bacteria  hitchhiker  0.00410027  normal 
 
 
-
 
NC_008789  Hhal_0955  type IV pilus assembly PilZ  27.87 
 
 
142 aa  41.6  0.003  Halorhodospira halophila SL1  Bacteria  normal  0.46319  n/a   
 
 
-
 
NC_010501  PputW619_1681  type IV pilus assembly PilZ  31.25 
 
 
99 aa  41.2  0.005  Pseudomonas putida W619  Bacteria  normal  0.936113  normal 
 
 
-
 
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