8 homologs were found in PanDaTox collection
for query gene Dfer_5232 on replicon NC_013037
Organism: Dyadobacter fermentans DSM 18053



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013037  Dfer_5232  Antirestriction ArdA family protein  100 
 
 
185 aa  378  1e-104  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.929536  normal 
 
 
-
 
NC_013037  Dfer_0884  Antirestriction ArdA family protein  71.74 
 
 
185 aa  283  1.0000000000000001e-75  Dyadobacter fermentans DSM 18053  Bacteria  hitchhiker  0.000370764  normal  0.871136 
 
 
-
 
NC_011081  SeHA_A0058  anti-restriction protein  38.64 
 
 
166 aa  125  3e-28  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  hitchhiker  0.0000101972 
 
 
-
 
NC_010158  YpAngola_0136  putative antirestriction protein  37.84 
 
 
168 aa  121  5e-27  Yersinia pestis Angola  Bacteria  normal  hitchhiker  0.000000574312 
 
 
-
 
NC_009788  EcE24377A_D0073  putative anti-restriction protein  36.49 
 
 
186 aa  91.3  8e-18  Escherichia coli E24377A  Bacteria  normal  0.316567  n/a   
 
 
-
 
NC_004116  SAG0930  Tn916 hypothetical protein  29.52 
 
 
165 aa  52  0.000005  Streptococcus agalactiae 2603V/R  Bacteria  normal  n/a   
 
 
-
 
NC_006368  lpp2407  hypothetical protein  30.16 
 
 
168 aa  50.4  0.00002  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_002947  PP_2295  antirestriction protein, putative  51.52 
 
 
194 aa  41.2  0.009  Pseudomonas putida KT2440  Bacteria  normal  normal  0.0473795 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>