9 homologs were found in PanDaTox collection
for query gene Coch_0420 on replicon NC_013162
Organism: Capnocytophaga ochracea DSM 7271



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013162  Coch_0420  preprotein translocase, SecE subunit  100 
 
 
61 aa  125  3e-28  Capnocytophaga ochracea DSM 7271  Bacteria  hitchhiker  0.0000015619  n/a   
 
 
-
 
NC_014230  CA2559_00055  elongation factor Tu  60 
 
 
65 aa  80.5  0.000000000000008  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
NC_009441  Fjoh_1937  preprotein translocase, SecE subunit  42.37 
 
 
65 aa  61.2  0.000000005  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_013061  Phep_0843  preprotein translocase, SecE subunit  37.93 
 
 
65 aa  53.5  0.0000008  Pedobacter heparinus DSM 2366  Bacteria  normal  normal  0.481373 
 
 
-
 
NC_013132  Cpin_1701  preprotein translocase, SecE subunit  29.82 
 
 
63 aa  48.1  0.00004  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0108119  normal 
 
 
-
 
NC_013037  Dfer_3455  preprotein translocase, SecE subunit  36.36 
 
 
63 aa  46.6  0.0001  Dyadobacter fermentans DSM 18053  Bacteria  hitchhiker  0.00261643  normal  0.0335221 
 
 
-
 
NC_013730  Slin_4483  preprotein translocase, SecE subunit  35.09 
 
 
63 aa  45.4  0.0003  Spirosoma linguale DSM 74  Bacteria  hitchhiker  0.00005242  normal 
 
 
-
 
NC_010117  COXBURSA331_A0321  preprotein translocase, SecE subunit  39.22 
 
 
127 aa  43.5  0.001  Coxiella burnetii RSA 331  Bacteria  hitchhiker  0.00000345657  n/a   
 
 
-
 
NC_009727  CBUD_1868  protein translocase subunit  37.25 
 
 
127 aa  41.2  0.005  Coxiella burnetii Dugway 5J108-111  Bacteria  hitchhiker  0.0000227332  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>