8 homologs were found in PanDaTox collection
for query gene CPS_1624 on replicon NC_003910
Organism: Colwellia psychrerythraea 34H



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_003910  CPS_1624  hypothetical protein  100 
 
 
110 aa  221  2e-57  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_2664  hypothetical protein  31.93 
 
 
119 aa  58.2  0.00000004  Serratia proteamaculans 568  Bacteria  normal  hitchhiker  0.000000399438 
 
 
-
 
NC_010322  PputGB1_1732  hypothetical protein  28.3 
 
 
115 aa  56.2  0.0000001  Pseudomonas putida GB-1  Bacteria  normal  hitchhiker  0.000000066892 
 
 
-
 
NC_003910  CPS_3128  hypothetical protein  32.17 
 
 
111 aa  48.9  0.00002  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_2293  hypothetical protein  32.39 
 
 
112 aa  47.4  0.00007  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_008687  Pden_3772  hypothetical protein  39.34 
 
 
155 aa  45.4  0.0003  Paracoccus denitrificans PD1222  Bacteria  hitchhiker  0.00000130829  unclonable  0.0000152701 
 
 
-
 
NC_010717  PXO_00910  hypothetical protein  35.48 
 
 
65 aa  42.4  0.002  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.0375994  n/a   
 
 
-
 
NC_007963  Csal_2297  hypothetical protein  30.65 
 
 
125 aa  41.2  0.005  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.146636  n/a   
 
 
-
 
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