7 homologs were found in PanDaTox collection
for query gene CPS_0549 on replicon NC_003910
Organism: Colwellia psychrerythraea 34H



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_003910  CPS_0549  hypothetical protein  100 
 
 
441 aa  912    Colwellia psychrerythraea 34H  Bacteria  normal  0.16558  n/a   
 
 
-
 
NC_009831  Ssed_3567  hypothetical protein  44.14 
 
 
514 aa  451  1e-125  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_2996  hypothetical protein  38.59 
 
 
561 aa  374  1e-102  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_007954  Sden_0804  peptidase A1, pepsin  40.98 
 
 
429 aa  334  2e-90  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_0787  peptidase A1, pepsin  41.63 
 
 
445 aa  328  1.0000000000000001e-88  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_006670  CNA05650  endopeptidase, putative  20.22 
 
 
438 aa  50.4  0.00005  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  n/a   
 
 
-
 
NC_009046  PICST_73446  aspartic proteinase precursor  21.22 
 
 
417 aa  43.1  0.01  Scheffersomyces stipitis CBS 6054  Eukaryota  normal  normal 
 
 
-
 
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