6 homologs were found in PanDaTox collection
for query gene Bamb_5929 on replicon NC_008392
Organism: Burkholderia ambifaria AMMD



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008392  Bamb_5929  hypothetical protein  100 
 
 
206 aa  421  1e-117  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.042189 
 
 
-
 
NC_013440  Hoch_2504  hypothetical protein  44.54 
 
 
173 aa  94.4  1e-18  Haliangium ochraceum DSM 14365  Bacteria  normal  0.503819  normal 
 
 
-
 
NC_009719  Plav_0034  hypothetical protein  37.61 
 
 
200 aa  74.7  0.0000000000008  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.953249  normal 
 
 
-
 
NC_008322  Shewmr7_1998  hypothetical protein  30.69 
 
 
176 aa  44.7  0.0009  Shewanella sp. MR-7  Bacteria  normal  0.0693742  unclonable  0.0000181404 
 
 
-
 
NC_008577  Shewana3_2063  hypothetical protein  30.61 
 
 
176 aa  44.3  0.001  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.000155874  hitchhiker  0.00000857525 
 
 
-
 
NC_008321  Shewmr4_1976  hypothetical protein  28.33 
 
 
176 aa  43.9  0.002  Shewanella sp. MR-4  Bacteria  hitchhiker  0.0011077  normal  0.308944 
 
 
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