6 homologs were found in PanDaTox collection
for query gene BBta_4952 on replicon NC_009485
Organism: Bradyrhizobium sp. BTAi1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009485  BBta_4952  hypothetical protein  100 
 
 
74 aa  146  9e-35  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.144108  normal 
 
 
-
 
NC_010511  M446_3982  prophage CP4-57 regulatory  41.07 
 
 
63 aa  46.6  0.0001  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_0469  DNA binding domain-containing protein  31.58 
 
 
82 aa  41.6  0.003  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_0245  Prophage CP4-57 regulatory  36.54 
 
 
80 aa  41.6  0.004  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_4217  hypothetical protein  35.38 
 
 
92 aa  40.4  0.008  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.446086  n/a   
 
 
-
 
NC_009485  BBta_6376  hypothetical protein  40.43 
 
 
57 aa  40  0.01  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0398302  normal 
 
 
-
 
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