6 homologs were found in PanDaTox collection
for query gene Avi_8013 on replicon NC_011982
Organism: Agrobacterium vitis S4



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011982  Avi_8013  hypothetical protein  100 
 
 
67 aa  135  1e-31  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_2619  hypothetical protein  52.63 
 
 
70 aa  66.2  0.0000000002  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.0900989  normal 
 
 
-
 
NC_012848  Rleg_5041  hypothetical protein  50 
 
 
118 aa  64.7  0.0000000004  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.402352  normal 
 
 
-
 
NC_011989  Avi_3757  hypothetical protein  50 
 
 
70 aa  63.5  0.0000000008  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_011368  Rleg2_5322  hypothetical protein  51.79 
 
 
117 aa  63.5  0.0000000009  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_009620  Smed_4901  hypothetical protein  51.79 
 
 
70 aa  62  0.000000003  Sinorhizobium medicae WSM419  Bacteria  normal  0.0373427  normal  0.817222 
 
 
-
 
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