7 homologs were found in PanDaTox collection
for query gene Avi_5124 on replicon NC_011988
Organism: Agrobacterium vitis S4



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011988  Avi_5124  hypothetical protein  100 
 
 
165 aa  328  1e-89  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_2614  hypothetical protein  63.58 
 
 
162 aa  197  3.9999999999999996e-50  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_2282  hypothetical protein  70.59 
 
 
162 aa  177  7e-44  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_2066  hypothetical protein  48.44 
 
 
228 aa  114  3.9999999999999997e-25  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.081584 
 
 
-
 
NC_010725  Mpop_1040  hypothetical protein  40.94 
 
 
223 aa  108  3e-23  Methylobacterium populi BJ001  Bacteria  normal  0.694295  normal 
 
 
-
 
NC_011729  PCC7424_0693  hypothetical protein  28.72 
 
 
112 aa  50.8  0.000009  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.715252 
 
 
-
 
NC_011729  PCC7424_5189  hypothetical protein  27.34 
 
 
124 aa  50.1  0.00002  Cyanothece sp. PCC 7424  Bacteria  n/a    hitchhiker  0.00000000000847613 
 
 
-
 
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