6 homologs were found in PanDaTox collection
for query gene Ajs_4265 on replicon NC_008766
Organism: Acidovorax sp. JS42



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008766  Ajs_4265  entry exclusion protein TrbK  100 
 
 
75 aa  152  1e-36  Acidovorax sp. JS42  Bacteria  normal  0.0346234  decreased coverage  0.00151767 
 
 
-
 
NC_007337  Reut_D6511  entry exclusion protein TrbK  98.67 
 
 
75 aa  151  2.9999999999999998e-36  Ralstonia eutropha JMP134  Bacteria  normal  0.183593  n/a   
 
 
-
 
NC_008385  Bamb_6626  entry exclusion protein TrbK  98.67 
 
 
75 aa  151  2.9999999999999998e-36  Burkholderia ambifaria AMMD  Bacteria  normal  0.269198  n/a   
 
 
-
 
NC_008463  PA14_15530  entry/exclusion protein TrbK  55.56 
 
 
91 aa  60.5  0.000000007  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  hitchhiker  8.7776e-16  unclonable  3.76194e-22 
 
 
-
 
NC_008782  Ajs_2537  putative entry/exclusion protein TrbK  55.56 
 
 
89 aa  60.5  0.000000007  Acidovorax sp. JS42  Bacteria  normal  0.256904  hitchhiker  0.0000499365 
 
 
-
 
NC_008766  Ajs_4316  putative entry/exclusion protein TrbK  50.94 
 
 
91 aa  60.1  0.00000001  Acidovorax sp. JS42  Bacteria  normal  0.183602  normal 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>