Gene Aazo_5174 details

Gene Information

• Locus tag: Aazo_5174
• ID: 9342981
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: 'Nostoc azollae' 0708
• Kingdom: Bacteria
• Replicon accession: NC_014248
• Strand: +
• Start bp: 5297703
• End bp: 5299754
• Gene Length: 2052 bp
• Protein Length: 683 aa
• Translation table: 11
• GC content: 46%
• Product: exoribonuclease II
• Protein accession: YP_003723348
• Protein GI: 298493171

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGAGAAGG GGACGCTAGT TGAATTTAGG GTTCAAGGCG ATCGCCGTCT GGGAGTGGTA 
GATCGTCCAG ACGGAAAGAC CCGTTGGTTT GTAGTAGATG AACGAGGTCA ATCCCACAGC 
CTCGCGCCTC GACAACTAAC CTATACAGTA AACGGGGAAA CTTACAAACC CTCAGATATT 
GCCCAATTTT CAGAACAAGT CAAACCGTAC CTAGATCCAT CTAGCTTAGA AGTGGCTTGG 
GAATTATTGG TGGAAGATGG AGAAACAGTC ACCCCTAGCC AAATGGCTAA TTTGCTGTTT 
TCACAATCTG AACCGCCATA CTGTTACGCT GCTCATTGCT TGTTATCAGA AGACAAACTC 
TATTTCAAGC AAAAAGGTGA AGCTTATGAA CCCCGCAGCG CAGCACAAGT AGCAGAACGT 
AAGCATCAAA TAGAAGTAGA AGCGCAAAAA GCTAAGGGAC AGCAGGAATT TTTAGCGCGT 
GTAGAACAGG CACTCAAGGG TGAAGCAGTA GAATGGCAAC GGCAAGACCG TCAGCGTTTG 
GAAGCATTAG AAAAGTATGC ATCCTTAGTG GCGGATATTG TGCGGACGGG GGTAAACTCC 
GATTCTTTAG CCCGCGCTTA CCCACCTCCA GCCCCAGTCT TAGAAACCAT GAATATGCTG 
GGACGTTCTG GTACACCTCT AGCAGCCTTT CAACTGTTGA TCGACTTGGG TTGGTGGGGT 
CCGCATGAGA ACCTGTTCCT GCGTCGTTCT TCAATTCCCG TCCAGTTTCC CAACAAGGTA 
TTAGAAGTGG CGCAACAACG CTTGGATTTT CCACCAACTG ACTTAGATAC AAATCGACTG 
GATCTAACTC ATCTCAAGGT ATACACAATT GATGATGAAA GTACCACGGA AATAGATGAT 
GGTCTAAGTT GGGAAGTATT ACTAGATGGA CAGGAACGGC TATGGGTGCA TATTGCTGAC 
CCTACGCGGT GGTTAATGCC AGAAGATGAA TTAGATTTAG AAGCCAGAAA GCGGGGAAGC 
ACTGTTTATT TACCGACGGG GATGATTCCC ATGTTCCCGG AGGTACTAGC AACTGGTCCG 
ATGAGTTTGG TACAGGGGAA AATTTGTTAC TCCCTCAGCT TTGGCATAGT TTTGGACGAA 
ACTGGGGCTG TGGAAGATTA CTGTATTCAT GCCAGCTTGA TGAAGCCTAC CTATCGTCTC 
ACCTATGAAG ATGTAGATGA GATGCTGGAA TTAGGGGTAG AAGCAGAACC AGAAATTGCT 
GCGATCGCAA ATTGGGCAAA AAAGCGTAAA ACCTGGAGAT ATAACCAAGG AGCCATCAGC 
ATCAATATGC CAGAGGCAAT GATTAAAGTC AAAGGCGATG ATGTCACCAT AGATATTTTA 
GATGATTCCT CCTCCCGGCA ATTAGTTGCC GAAATGATGA TTCTTGCGGG AGAAGTAGCC 
GCACGTTACG GTCAAACCCA TAACATTCCC CTACCCTTCC GTGGTCAACC CCAACCAGAA 
CTACCACCAG AAGAAGAATT ACTCCTACTT CCCGCAGGCT TTGTTCGTGC CTGTGCCATG 
CGTCGGTGTA TGCCCAAGAG CGAAATGAGT ATTACTCCTG TGCGCCATGC TGGTTTGGGA 
CTAGATACCT ACACCCAAGC AACTTCACCA ATTCGTCGTT ACAGCGACCT ATTAACCCAC 
TTCCAACTCA AGGCACACCT GCGGGGTGAA GATTTGCCCT TTTCAGCCGA ACAACTCAAA 
GAAGTGATGA TGACCGTCAC CACTACCACC CAAGAAGTGA CAATGGTGGA ACGACAAACT 
AACAGATATT ATGCTCTAGA ATATTTGCGT CGTCATCCTG AACAGATATG GCAAATCACA 
GTTTTGATGT GGTTACGAGA AGATAGCAAT TTAGCATTAA TTCTGTTAGA AGATTTAGGT 
TTACAATTGC CAATGGCCTT TAGAAGGACG GTCAATTTAG GAGAACAATT ATTAGTGAAA 
GTGAGCCTTG CTGATCCACA GAAAGATATG ATTCAGTTTC AAGAAATAAT TTATCAAGAA 
GCTGCTCTTT AA 

 

Protein sequence

MEKGTLVEFR VQGDRRLGVV DRPDGKTRWF VVDERGQSHS LAPRQLTYTV NGETYKPSDI 
AQFSEQVKPY LDPSSLEVAW ELLVEDGETV TPSQMANLLF SQSEPPYCYA AHCLLSEDKL 
YFKQKGEAYE PRSAAQVAER KHQIEVEAQK AKGQQEFLAR VEQALKGEAV EWQRQDRQRL 
EALEKYASLV ADIVRTGVNS DSLARAYPPP APVLETMNML GRSGTPLAAF QLLIDLGWWG 
PHENLFLRRS SIPVQFPNKV LEVAQQRLDF PPTDLDTNRL DLTHLKVYTI DDESTTEIDD 
GLSWEVLLDG QERLWVHIAD PTRWLMPEDE LDLEARKRGS TVYLPTGMIP MFPEVLATGP 
MSLVQGKICY SLSFGIVLDE TGAVEDYCIH ASLMKPTYRL TYEDVDEMLE LGVEAEPEIA 
AIANWAKKRK TWRYNQGAIS INMPEAMIKV KGDDVTIDIL DDSSSRQLVA EMMILAGEVA 
ARYGQTHNIP LPFRGQPQPE LPPEEELLLL PAGFVRACAM RRCMPKSEMS ITPVRHAGLG 
LDTYTQATSP IRRYSDLLTH FQLKAHLRGE DLPFSAEQLK EVMMTVTTTT QEVTMVERQT 
NRYYALEYLR RHPEQIWQIT VLMWLREDSN LALILLEDLG LQLPMAFRRT VNLGEQLLVK 
VSLADPQKDM IQFQEIIYQE AAL