| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aazo_1083 |
|---|
| Symbol | |
|---|
| ID | 9338879 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | 'Nostoc azollae' 0708 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014248 |
|---|
| Strand | + |
|---|
| Start bp | 1160510 |
|---|
| End bp | 1165174 |
|---|
| Gene Length | 4665 bp |
|---|
| Protein Length | 1554 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | |
|---|
| Product | hedgehog/intein hint domain-containing protein |
|---|
| Protein accession | YP_003720560 |
|---|
| Protein GI | 298490383 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.210582 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTTCAAG AACTGGAACG TAAACGCCAG AGTGCATCTT TCCCCGAATC TGCTCCAGCA
GCCAATCCTG TATTTTTTAG AACCTACAGC CGTCGTACAG ACGCGGGTTT AAGAGAATCC
TGGAATGAAG TGTGCGATCG CACACTTAAA GGCTTAGTCG AATTAGGCAA ACTGAGCCGC
GAAGAAGCCG CCATTTTAGA TAAAATGCAG CGCAATATGA GAGCTTTACC CAGCGGACGC
TGGTTGTGGG TAGGAGGAAC CAACTGGTTA ACCAAACCCA AAAACTTCTC CGGTGCTTAT
AACTGTACCT CCACCAACCT CCTAGACTGG AAAGCCTTCG GTTTAATGAT GGACCTAGCC
ATGATGGGTT GTGGTACAGG AGCAGTGATA GAACCACAGT ATATTAAAAA GCTGCCCATC
ATCCGCAATC GCCTAAATAT CACCGTCAAA AGTGAAATTG GTAGCACTCC TAAGGAACAG
CGTCGTGAAT TTACACAAAC CCATATAGAA GCTAACACCG CTACTATCTA CGTCGGAGAC
AGCCGTGAAG GTTGGGTTGA GTCCTATCAA ACCCTTTTAG AACTTTCCAG CGATGAACGC
TTTACAGGTG AAGTTCAGGT ATTTGTAGAT ATTAGCGATG TGCGTCAATC AGGGGAAACC
CTGAAAGGCT TTGGCGGTAT GGCTAATCCT GTGAAGTTGC CTGGATTGTA TCAGCGTTGT
GCCTCTATTC TCAATAAGGC TTTAGGTAGA CAATTAAACT CAGTTGAATG CTGTTTATTA
ATTGATGAAG CTGCTGTCAC AATTGTTGCT GGAAATATTC GTCGCTGTCT TCCTGAAGAT
GCCTTAGTTC ATACATCCAA AGGTCTTGTA CCCATTCGTG ATGTGCAAGT CGGTGACTTA
GTACAAACTC CTTTAGGATT TCGTCGAGTA GTTGATAAAT TCGACCAAGG ATTTCAGGAT
GTCTATGAAA TTGAAACTAA TGCAACTTAC CCTAGAGCAA CTTTAAACCA CAAACAAGCA
GTCTTAGCAG ATGCTAAAGG TGAAGTTAAC TGGAAATCAG TTGCAAGTTT AGTGGAAGGC
GATCGCCTGC TTCATAACAT ACAAATCCTA CCTGGTACAG TTACCCATCT TCCTGCTGAT
CTTACAGAAT CCAGCCCTTC CCAAAGCCGA ACAATAAAGT CCTTGCTTGT TCCTGATCTC
ACACCTGAAG TAGCTTGGCT AATAGGATTG ACTCACGGTG ATGGCTATGT TGCCCTTGGT
CGTAATAAGT ATGATAAGCC CTATGGCCAT GTTCAATGGT CAGTGAATAG CTTACAGATT
GAACAAACAG AAATAATTCA AGCCAAAATA GATTCTGCCT TGGCTTTATT TGGACTGACT
GCTACTCATA GCGTGACCAA AGGTGAAAAT ACTGCCAAGT CAATTTGTTC TTCTATCCGA
CTGGCTGAAT ACTTTCATGG CTATATTAAG CAGCCTAATG TTCCCTTAAT AATTCCTAGT
TTTATTTTGC AAGGTTCAGT AGATATTAGA TCTGCTTACT TAGCTGGATT AATAGACAGT
AATGGAGCAG TTAATAATCG GCTTCCCCAT CTAGTTACAT CAGTTTATCG CTCATTTATT
AGACAAGTTG GTACTGTTTT ATCCAGCTTA GGTATGGCTG CAAGAACTAC CACAAGTTGT
CCAGAAAAGC AGGAATGGCA AGTTAAGTAC AACCTGACAC TACCTGCCCT TAAACATTAT
TATAACGCCC TAATTGCCCC CCATTCAGTT AAGGGAGAAC TGCCTCAGGG ACTTAAAATG
TATGGTTTTA CTGTTCCTGG TGCGATGATG TGCGAAGCTT ACACCTACAG CGAAATGCGA
GAAATGGGTT TCCAGGGTTC TTGCACTGTT GATGCCAACT ATGAACGCTA TATAGCTGAA
GCTGATATCT CACTGGATAT TGCTGTGACA GTCAAAGGTT TAGGAAGTTA CGATCATGTT
CAAACTTATG ACATTGAAGT GGAAGAAGCC CATTGTTTTT ACTGCGACGG TTATCTGACG
CATAACTCAG CTGGGATGAG ACAATTCGTT GCAGAAGATG AACAAGGCGC AACTGCCAAA
GATAACTTAT GGCAACAAGA CACAGAAGGC AACTGGCGCA TAGATTCAGA ACGTGATTCT
TTGCGGATGG CGAACCATAC GAGAGTATTT CATCGCAAAC CAACATTAGA AGAATCTATC
GGTGCTGTAC GTAAGCAGTA TTACAGTGGT GAGGGAGCAA TTCAATGGGC TGGTGAAGCA
GTCGCTAGGG CTAATGCTGA TTTACTAAAT ACACCAGAAT TGAAAACTGA GTTTCTGCAA
GCTTACGAGC AAGGAAAAGC TCAGGATTGG ATAAAAGAAT ACTATCCTGA AATTGATCCT
GATGAGCTAG AACATAGAAT AGGTAGGTTT GGGCTAAATC CGTGCGGAGA AATTGTAGGT
AGTAATTTCC ACTGCAATTT ATCTGAAGTA CACTTAAACC AACTTGACCC CGACAACTAC
AAAGAACAAG AGGAAGCATT TACTGCAGGG GCGCTTTCCG TAGCCGCACT GTTAAATCAT
AAATTTCAAG AACCCCGCTA TCAATACAGT CGGGAACTTG ATCCCATTGT CGGCGTTTCC
TTCACTGGTT TATTTGATTT CTTTGTCCAT GCTTTTGGTG TGGACTGGTT GTGCTGGTGG
GAGCAAGGCA GACCAGAAAC ACCCGGAGGA ATGGTGTTTA AACGTGGTGA GCAAAAATAT
CTCAGCAAAT GGAGAGAAAT CGTACATAAA GCGGTTTGGG AATATTGCGA CAAGCACAAC
ATCAAATGCC CTAATCGTTG TACCACAGTG CAGCCGTCTG GGTGTCTTGA TCGCACAGCA
TTACGGATCT TTGATCAAGG TTTGCTTTAT GCTGATGAAA TACTCAATCC AGGTAGTGGT
GAAACCGTCA ACTTAAACTT GAGTGTGCGT AAAGGAATTC CCATTTCTAC AGGCATTGCT
AATCAACCCC TGCAACTGAT TAAAGTCACT TTAAGGAATG GGCGCATCCT CCGCATGACC
GCAAATCACC GTCTTTCCAT CAATGGAAGT TGGGTTTATG CAGCCGATAT GACTCCTGGT
ATGAAAATTG ATTTCAGTAT CGGCGAGTAT AAAAATCAGC AAGATGCATC TTTACTCAAT
ATTGATCAAT TCCAGTACAC ACGGGAAGGA AGACAATTAG AACTCGGTCA TAGTCCCGGA
ATCACAGCAA CTATGATTAA AACACCAAAA ACCATGTCTC CTGATTTGTC CTACTTTATT
GGAGCATTAT TTGGAGATGG CTGCTTGAGT CCTTATAAAC ACCACATCCG TTTTTGCAGG
AATGATTACG CATTAGTCCA AAGACTGCAA CAAATCGGAG AAGAACTTTT TGGTTTACAA
GGACAGATTC GCAAATATTC TAACAGAGAA GCTTTTGAAC TATCTTTTGC CAGCGTTCAG
CTTTTTAACT GGTTGCAACT GAATGGGTTA GCAAAAATAC AAGAAAGCCA AAGCCTCGAG
AGAATACCCT TAGCAATTCG TTGTTCTTCT CAAGCAACCA TCTTGTCTTT TTTCTGCGGT
TTAATTGACA CAGACGGCTG TATTCGTTCG ACAGGGCGGA TGTCTATTGA TAGTGCCAGT
GAAAAATTCC TGCGAAACCT CCAGGAAATT GGTGAAGCAG TGGGTCTGTG CTTCTCGATT
TTCCATAATA CCCAGGGAGA AAACAAGCAA GGTCAGAAGG ATATGTGGGG CTTATGTCTG
AGTCGGATGT TGTCTCAACC AGATGCCTTA GCTTATTTAA ACAAAAATAC CCAGAAAGCT
AAAGCTCGTC CTATCCCTTC TGCAAAACGG AGTTTCAAAT TTGAACCTTA CACTGTAAAA
TCTGTAGAGT GGGAAGAAAC CCCCGACTAT AGTTACGATT TCGCTGTGGA AGGAATAGAT
GATAATGACT CCTGGTACTG GCAGGGAGGA ATTAAATCTC ATAACACTAA ATCTCTCTTA
ACTGGTGCGA GTTCCGGCTG GCATCCTCCC AAAGCCCAAA GATTTATCCG CCGAATCACC
TTCCGTAAAA ATGACCCCGT AGCCCTAGCT TGTATAGATT ATGGTTATAA TGTCATCCCA
TCTCAATCTG ACAAAGACGA AAACGGCAAC TTACTCAACG ATCCTTTTGA CCCTAGTTGT
ACTGAATGGC TGGTAGAAAT ACCCGTTGCT GTCTCTTGGG CAGATTTACC AGGTGCTGAT
GTAATTGATG TGTCTAAATT CTCAGCCTTA GCCCAATTAG ATTTTGTAAT GCAAGTACAA
AAGTTCTACA CATCCCATAA CACCTCTGCA ACTTTAGAAC TGCGTTCTGA GGAAGTTGAA
CCTTTAGGAA AGCGCATCTA TGAAGCTATC CAAAACGATG AAGGGTATAT TTCTGCGGCT
TTATTAGCAA GGTTTGATGA TTTACAATCT TTCCCCCGCT TGCCCTTTGA ACCCATAGAC
AAGTCCACAT ATCAGCGTTT GTCTCAAGAA GTCAAGGCAC GACGGAAAAC AGATGACTTC
TGTGCAGCAC TAAGTCGTTA CGATTTAGGG GAAATGATGG AAGTAGGACC AAGTGGTTGT
GACTCTGATA AATGTATGTT CCCAGATCAG CCGCCAACTT CATAG
|
|---|
| Protein sequence | MVQELERKRQ SASFPESAPA ANPVFFRTYS RRTDAGLRES WNEVCDRTLK GLVELGKLSR
EEAAILDKMQ RNMRALPSGR WLWVGGTNWL TKPKNFSGAY NCTSTNLLDW KAFGLMMDLA
MMGCGTGAVI EPQYIKKLPI IRNRLNITVK SEIGSTPKEQ RREFTQTHIE ANTATIYVGD
SREGWVESYQ TLLELSSDER FTGEVQVFVD ISDVRQSGET LKGFGGMANP VKLPGLYQRC
ASILNKALGR QLNSVECCLL IDEAAVTIVA GNIRRCLPED ALVHTSKGLV PIRDVQVGDL
VQTPLGFRRV VDKFDQGFQD VYEIETNATY PRATLNHKQA VLADAKGEVN WKSVASLVEG
DRLLHNIQIL PGTVTHLPAD LTESSPSQSR TIKSLLVPDL TPEVAWLIGL THGDGYVALG
RNKYDKPYGH VQWSVNSLQI EQTEIIQAKI DSALALFGLT ATHSVTKGEN TAKSICSSIR
LAEYFHGYIK QPNVPLIIPS FILQGSVDIR SAYLAGLIDS NGAVNNRLPH LVTSVYRSFI
RQVGTVLSSL GMAARTTTSC PEKQEWQVKY NLTLPALKHY YNALIAPHSV KGELPQGLKM
YGFTVPGAMM CEAYTYSEMR EMGFQGSCTV DANYERYIAE ADISLDIAVT VKGLGSYDHV
QTYDIEVEEA HCFYCDGYLT HNSAGMRQFV AEDEQGATAK DNLWQQDTEG NWRIDSERDS
LRMANHTRVF HRKPTLEESI GAVRKQYYSG EGAIQWAGEA VARANADLLN TPELKTEFLQ
AYEQGKAQDW IKEYYPEIDP DELEHRIGRF GLNPCGEIVG SNFHCNLSEV HLNQLDPDNY
KEQEEAFTAG ALSVAALLNH KFQEPRYQYS RELDPIVGVS FTGLFDFFVH AFGVDWLCWW
EQGRPETPGG MVFKRGEQKY LSKWREIVHK AVWEYCDKHN IKCPNRCTTV QPSGCLDRTA
LRIFDQGLLY ADEILNPGSG ETVNLNLSVR KGIPISTGIA NQPLQLIKVT LRNGRILRMT
ANHRLSINGS WVYAADMTPG MKIDFSIGEY KNQQDASLLN IDQFQYTREG RQLELGHSPG
ITATMIKTPK TMSPDLSYFI GALFGDGCLS PYKHHIRFCR NDYALVQRLQ QIGEELFGLQ
GQIRKYSNRE AFELSFASVQ LFNWLQLNGL AKIQESQSLE RIPLAIRCSS QATILSFFCG
LIDTDGCIRS TGRMSIDSAS EKFLRNLQEI GEAVGLCFSI FHNTQGENKQ GQKDMWGLCL
SRMLSQPDAL AYLNKNTQKA KARPIPSAKR SFKFEPYTVK SVEWEETPDY SYDFAVEGID
DNDSWYWQGG IKSHNTKSLL TGASSGWHPP KAQRFIRRIT FRKNDPVALA CIDYGYNVIP
SQSDKDENGN LLNDPFDPSC TEWLVEIPVA VSWADLPGAD VIDVSKFSAL AQLDFVMQVQ
KFYTSHNTSA TLELRSEEVE PLGKRIYEAI QNDEGYISAA LLARFDDLQS FPRLPFEPID
KSTYQRLSQE VKARRKTDDF CAALSRYDLG EMMEVGPSGC DSDKCMFPDQ PPTS
|
|---|
| |