Gene CA2559_11303 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCA2559_11303 
Symbol 
ID9297748 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCroceibacter atlanticus HTCC2559 
KingdomBacteria 
Replicon accessionNC_014230 
Strand
Start bp2455828 
End bp2457132 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content33% 
IMG OID 
Productdeoxyribodipyrimidine photolyase-class I 
Protein accessionYP_003717002 
Protein GI298208823 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAAAAA AAGTTTCAAT ATTCTGGTTT AGAAGAGATT TACGCTTAGA TGATAATGTA 
GGGTTTTTAG AAGCTTTAAA AGGCGATTAT CCTGTTTTAC CCTTATTTAT TTTCGATAAA
GATATATTAG ATAAACTTCC TGAAAATGAT GCTCGCGTCA CGTTTATTTT TGAAACCCTA
CAAGAAATGC GTAAAGAGCT ACAGGATGAC TATGATAGTA GTTTAGCAAT GTTTCACGAT
ACACCTGAAA AAGTATTTAA ATCTTTAGTG AAAGATTATC AGATTCAAGA GGTGTTTACC
AACAGAGATT ACGAGCCATA TGCAAAAGAG AGAGACACAA GTATTAAGGA ATTACTAAGC
AAGAATAATA TTTCATTTAA TACATATAAA GATCAAGTAA TATTTGAAAA AGACGAAGTA
GTTAAAAAGG ATGGCGATCC TTACTTAGTG TATACGCCTT ACAAGAATAC GTGGAAAGAG
AATTTTAAAG ACCACACTTT AAAGATTCAT TATACATCTC AACATTTAGA TAATACCGTA
AAAAACACAA GACTTCCAAA TGTGTCTTTA TCTGAAATGG GGTTTAAAAA ATCCTCAATT
TCATTTCCTG AGTACGATAC TTCTCCAACA TTAATTGAAA ACTACAACGA TACTAGAAAC
TTTCCAGCCA AGGATGGTAC ATCTAATCTA AGTCCGCATT TAAGGTTTGG TACAGTTGGT
ATCAGAAAAA TATACAAGAA AGCTATAGAT GCTAAAGACG AGACATTCTG GAACGAATTA
ATTTGGAGAG AATTCTTCAT GCAGATACTT TATCATTTTC CGGAAACTGT AAATAATGCT
TTTAAAAAGA AGTACGACCG TATAGAGTGG CGTAATAATG AAGACGAATT TGAAAAATGG
AAAACTGGTA CTACTGGTTA TCCTTTAGTA GATGCAGGTA TGCGCCAGTT AAATGAAACT
GGCTTAATGC ATAACCGTGT TCGTATGGTA GTAGGAAGCT TTTTGTGTAA ACACTTATTA
ATAGATTGGC GTTGGGGCGA AGCATATTTT GCAGAAAAAC TGTTAGATTA TGAAATGTCC
AGCAATGTTG GTAATTGGCA ATGGGTTGCA GGCTCTGGTG TAGATGCTGC TCCGTACTTT
AGAATTTTTA ACCCAACAAC TCAAATAGAT AAGTTTGATA AAAATAAAAC ATACATTAAC
CATTGGGTTA AAGAGTACAA CACAAATAAG TATCCAGAAA AGATGGTAGA CCATAAAGAA
GCTAGAGAGC GTTGTTTAAA TGCTTATAAA TCTGCTTTAA ATTAA
 
Protein sequence
MSKKVSIFWF RRDLRLDDNV GFLEALKGDY PVLPLFIFDK DILDKLPEND ARVTFIFETL 
QEMRKELQDD YDSSLAMFHD TPEKVFKSLV KDYQIQEVFT NRDYEPYAKE RDTSIKELLS
KNNISFNTYK DQVIFEKDEV VKKDGDPYLV YTPYKNTWKE NFKDHTLKIH YTSQHLDNTV
KNTRLPNVSL SEMGFKKSSI SFPEYDTSPT LIENYNDTRN FPAKDGTSNL SPHLRFGTVG
IRKIYKKAID AKDETFWNEL IWREFFMQIL YHFPETVNNA FKKKYDRIEW RNNEDEFEKW
KTGTTGYPLV DAGMRQLNET GLMHNRVRMV VGSFLCKHLL IDWRWGEAYF AEKLLDYEMS
SNVGNWQWVA GSGVDAAPYF RIFNPTTQID KFDKNKTYIN HWVKEYNTNK YPEKMVDHKE
ARERCLNAYK SALN