Gene CA2559_10788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCA2559_10788 
Symbol 
ID9297645 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCroceibacter atlanticus HTCC2559 
KingdomBacteria 
Replicon accessionNC_014230 
Strand
Start bp2352626 
End bp2353489 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content33% 
IMG OID 
Productputative TonB-dependent outer membrane receptor protein 
Protein accessionYP_003716899 
Protein GI298208720 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.65649 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACCAA AATTTAAAAT TAGCATTCCA GAACCTTGCC ACGAAGATTG GTCTAAAATG 
ACTCCTACAG AAAAAGGACG TCATTGTAAA GCCTGTTCTA AAGAAGTAAT AGACTTTACA
CATTTTAGTA ATGAGGCGCT ACACAAACGT ATTACTCAAG GCGAGTCACT GTGTGGTCGT
TTTTTACCAC ATCAATTAGA TACACCTTTA ACTATAGAGC GTAAAAAGAA TTCAATTTCA
TTTAGTAAAA TTGCAGCAAC GTTAGCATTA CCACTTAGTG TTATATCTAC CAATATTAGT
AATGCACAAG AGTCTAAGTC CAAGACTGAA CAAACAATAA ATACCAGTAA AACTTATACG
TCCTTAGGTA TAGGAATGCA ACATAGGCCT TTAAAACCAT TAACCTCTAC TCTATCTGGT
ACAGTAACAG ATGAAAGTGG TTTACCGTTA CCAGGCGTAA ATATTATTGT AAAAGGTACA
ACTCGAGGTA CACAAACAGA TTTTGATGGT AATTATTCCA TTTCAGCTTT AAAAGATGAA
ATACTAGTAT TTAGTTATTT GGGTTTTGAA ACTATTGAAA AATCTATAAA ATCAAATACA
ACTACTTTAA ATGTGGAACT AGGTGCAGGT GATTTCTTAG GAGAAATTGT TGTTTTTGCA
GGTTATGTAA CTTATGAAGA AGAAAATGAA TACAAAATAG ATCCTGAGTT TTTAGAAGAA
CAAAGAGCTC ATAGAGCAAA ACTAAAAAAA GCAAGAGAAA ATCGTGTGAG ATTTATGACA
CGTAAAGCTA AAGAGCGTAA GGAAGCACGG CAATTAAAAA GAGCTAAACG TAAAGAAGAG
AGACAAAAAA ACAGAGATTC TTAG
 
Protein sequence
MTPKFKISIP EPCHEDWSKM TPTEKGRHCK ACSKEVIDFT HFSNEALHKR ITQGESLCGR 
FLPHQLDTPL TIERKKNSIS FSKIAATLAL PLSVISTNIS NAQESKSKTE QTINTSKTYT
SLGIGMQHRP LKPLTSTLSG TVTDESGLPL PGVNIIVKGT TRGTQTDFDG NYSISALKDE
ILVFSYLGFE TIEKSIKSNT TTLNVELGAG DFLGEIVVFA GYVTYEEENE YKIDPEFLEE
QRAHRAKLKK ARENRVRFMT RKAKERKEAR QLKRAKRKEE RQKNRDS