Gene CA2559_10688 details

Gene Information

• Locus tag: CA2559_10688
• ID: 9297626
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Croceibacter atlanticus HTCC2559
• Kingdom: Bacteria
• Replicon accession: NC_014230
• Strand: +
• Start bp: 2330636
• End bp: 2331334
• Gene Length: 699 bp
• Protein Length: 232 aa
• Translation table: 11
• GC content: 32%
• Product: ribosomal large subunit pseudouridine synthase D
• Protein accession: YP_003716881
• Protein GI: 298208702

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.359462
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAATGT ACTCAGACAA AAATAATCTC CAAGTTATTT ATGAAGATAA TCACTTAATT 
GTGGTTAATA AACGTGCTGG AGATATTGTA CAAGGTGACA AAACGGGTGA TAAACCATTA 
AGTGACGTTG TTAAATCTTA TATAAAAGAA AAGTATAACA AACCAGGAGA TGTATATCTT 
GGTGTAGTAC ATAGATTAGA TAGACCAACT ACTGGTGTCG TATTATTTTC TAAGACCTCT 
AAAGCCCTTT CCAGATTAAA TAAAATGTTC GCTAATCATG AGACCTCAAA AACATACTGG 
GCTGTTGTAA AAAATAATCC ACCTAAAGAA AAGGACAGAT TAGTACATTA TCTTAAACGT 
AATCCTAAGC AAAATAAATC CTACGCTCAT AAACACGAAG TTCCTGATAG CAAGAAAGCT 
ATATTAGATT ACATCTTAAA ATTCAGATTA AATAATTATA ATTTACTAGA GGTCAATCTT 
TTAACAGGAA GGCATCATCA AATTAGATCT CAGCTTTCAT CAATAGAATG TCCTATAAAA 
GGAGATTTAA AATATGGTGC AGACCGTAGC AATCCCGATG GCAGTATACA TTTGCACGCA 
AGGTTTTTAA CTATACAGCA TCCTGTAAAA AAAGAACCTA TTACTTTTAA AGCACCACTT 
CCAGAAGATG CTATTTGGAA AGCTTGCGAA AACGCATAA 

 

Protein sequence

MKMYSDKNNL QVIYEDNHLI VVNKRAGDIV QGDKTGDKPL SDVVKSYIKE KYNKPGDVYL 
GVVHRLDRPT TGVVLFSKTS KALSRLNKMF ANHETSKTYW AVVKNNPPKE KDRLVHYLKR 
NPKQNKSYAH KHEVPDSKKA ILDYILKFRL NNYNLLEVNL LTGRHHQIRS QLSSIECPIK 
GDLKYGADRS NPDGSIHLHA RFLTIQHPVK KEPITFKAPL PEDAIWKACE NA