Gene CA2559_10163 details

Gene Information

• Locus tag: CA2559_10163
• ID: 9297522
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Croceibacter atlanticus HTCC2559
• Kingdom: Bacteria
• Replicon accession: NC_014230
• Strand: -
• Start bp: 2223085
• End bp: 2223825
• Gene Length: 741 bp
• Protein Length: 246 aa
• Translation table: 11
• GC content: 33%
• Product: fatty acid desaturase
• Protein accession: YP_003716778
• Protein GI: 298208599

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTGTTA TTCTGTTTGT CTTAGTACTT TGGTATGGAG GCTTATTTTT TCAATCGTTT 
TTTCTTCATA GGTATGCTGC ACACCAAGTG TTTACAATGT CTAAGACAAT GGAACGTATT 
ACATTTATAC TTACATGGAT TTTTCAAGGC GCAAGTTATT TAAGTGCTTA CGGATATGGA 
ATAATGCACA GAATGCATCA CGCATATACA GATACTGAAG AAGATCCGCA CTCACCATCA 
CATGATGCTA ACATATTTGC TATGATGTGG AAAACAAAAA CCATTTATCA AGATATAAAC 
AAACAGCGCA TTACTGTAGA ACCTCGTTTT ACTAAAAACA TACCACAATG GTCTAGTTTT 
GATATGTTTG CAAGCTCAAG AATTTCTAGG TTATTATGGA TAACTGGCTA CATTTTATTC 
TTTGCATTCT TTGCAACTGC TTGGTGGCAA TGGTTATTAC TACCTATTAC ATTTTTAATG 
GCTCCTATTC ATGGTGTTAT CATAAACTGG TTTGGTCATA TTTATGGTTA TGTAAATTTT 
GCTATGAAAA ATACGAGCAA GAACTTATTT AGATTCGATT TTTTAATGAT GGGCGAAGGC 
TATCATAACA ATCATCACAA ATATGCAAGT CGTGCAAATT TTGGTGTAAA ATGGTATGAG 
ATAGATGTTA CATACCTTGT AATAAGACTA CTAGATGCTT TAAGAATTAT ACACCTTAAA 
CCTATACCTA TTAAGAAATA A 

 

Protein sequence

MAVILFVLVL WYGGLFFQSF FLHRYAAHQV FTMSKTMERI TFILTWIFQG ASYLSAYGYG 
IMHRMHHAYT DTEEDPHSPS HDANIFAMMW KTKTIYQDIN KQRITVEPRF TKNIPQWSSF 
DMFASSRISR LLWITGYILF FAFFATAWWQ WLLLPITFLM APIHGVIINW FGHIYGYVNF 
AMKNTSKNLF RFDFLMMGEG YHNNHHKYAS RANFGVKWYE IDVTYLVIRL LDALRIIHLK 
PIPIKK