| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CA2559_08846 |
|---|
| Symbol | |
|---|
| ID | 9297254 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Croceibacter atlanticus HTCC2559 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014230 |
|---|
| Strand | + |
|---|
| Start bp | 1943435 |
|---|
| End bp | 1944730 |
|---|
| Gene Length | 1296 bp |
|---|
| Protein Length | 431 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | |
|---|
| Product | tpr/glycosyl transferase domain protein |
|---|
| Protein accession | YP_003716516 |
|---|
| Protein GI | 298208337 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAAGCGAG TTCTCATCAT AGCTTATTAT TGGCCGCCAG CTGGTGGTCC TGGCGTACAA
CGTTGGTTAC AATTTGTAAA TTACTTACCA AATTTTAATA TACAACCAAT AGTATATGTT
CCAGACAACC CTAGTTATCC AATACTAGAT GAAACATTAC AATCTAAAAT AACAGATGTT
GAGGTTTTAA AACAACCCAT TTCAGAACCT TATAGATTTG CTAATTTTTT TTCTAAAAAA
GATACAGCTT CAATAAGCTC TGGCTTAATT CCTAAGGAGA AAAAACAATC TTTAGTACAA
AAGTTTTTGT TGTTTGTTCG AGGAAATTTC TTCATTCCAG ATGCCCGAAA GTCATGGGTT
AAGCCTTCGG TATGTTATTT AAAAGAATAC TTAAATAACA ATCCTGTAAA TGCTATTATA
ACAACAGGAC CTCCACACAG TCTCCATCTT ATAGGAAAGC AACTTAAAGA ACATATGGAT
GTTACTTGGC TTGCAGATTT TCGAGATCCT TGGACAACAA TTGGTTATCA TAAAAAGCTA
AAGCTAATGC CTTGGGCAAA ACGTAAACAT CTGGTATTAG AAGCCTCAGT CCTAAACACT
GCAGATCATA TTATAACTAC TAGCTTTACA ACAAAAAAAG AATTTGAAGC GCTAACTGAA
AAACCAATTT CAGTTATTAC AAATGGTTAC AATGCTTCAG ATTTTAAGTT AATTACAAAA
GTAGCTTTGG ATGCTAAATT TACTTTAGCG CACATAGGTT CTTTACTTTC TGATAGAAAT
CCGCAGGTTT TATGGCAGAC ATTACAGGAA TTAATTGAAG AGCATAAAGA TTTTTCAGAA
GCATTTCAGC TTAAATTAGC AGGCAAAGTT AGCGAGGATT TACTTTCTAC CATACAAAGC
TATAATTTAA AAAACCATAT AAACTTACTA GGTTATATTA CTCATGAAAG TGCGTTCAAA
GAAATGAAGA GCGCCCAACT TTTGTTGTTA ATTGAAATAG ATTCTGATGA GACTAAAGGT
ATAATTGCAG GTAAGGTATT TGAGTACCTT TTAGCTAAAC GACCAATATT AGCTATAGGT
CCAAAAAATT GGGATGTTTC TAAAATTATA AATGATACAA CTTCTGGTAA GGTCTTTCAT
TATGAAGAAA AGGACATTCT AAAACACTAT ATATTCAGTG CATTTCAGGA TTACAAAAAT
GGGATGCTTC ATATAAATTC TACCAATATC GAGCAGTTTT CTAGAAAACA ATTAACGCAA
CAACTTTCAG AAGTTATCTT AAAAGTTACC ACATAA
|
|---|
| Protein sequence | MKRVLIIAYY WPPAGGPGVQ RWLQFVNYLP NFNIQPIVYV PDNPSYPILD ETLQSKITDV
EVLKQPISEP YRFANFFSKK DTASISSGLI PKEKKQSLVQ KFLLFVRGNF FIPDARKSWV
KPSVCYLKEY LNNNPVNAII TTGPPHSLHL IGKQLKEHMD VTWLADFRDP WTTIGYHKKL
KLMPWAKRKH LVLEASVLNT ADHIITTSFT TKKEFEALTE KPISVITNGY NASDFKLITK
VALDAKFTLA HIGSLLSDRN PQVLWQTLQE LIEEHKDFSE AFQLKLAGKV SEDLLSTIQS
YNLKNHINLL GYITHESAFK EMKSAQLLLL IEIDSDETKG IIAGKVFEYL LAKRPILAIG
PKNWDVSKII NDTTSGKVFH YEEKDILKHY IFSAFQDYKN GMLHINSTNI EQFSRKQLTQ
QLSEVILKVT T
|
|---|
| |