Gene CA2559_08486 details

Gene Information

• Locus tag: CA2559_08486
• ID: 9297181
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Croceibacter atlanticus HTCC2559
• Kingdom: Bacteria
• Replicon accession: NC_014230
• Strand: +
• Start bp: 1857743
• End bp: 1858276
• Gene Length: 534 bp
• Protein Length: 177 aa
• Translation table: 11
• GC content: 35%
• Product: cationic outer membrane protein OmpH
• Protein accession: YP_003716444
• Protein GI: 298208265

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGAATA TTTTATTAGC AGCCTTTTTT ATAGTTACAA CTACTGTAAG TATGGCACAA 
TCTAAAGTTG GAACAGTAGA TGTAGATTTT ATCTTAACCA ACATGACAGA TGAGCTTAAA 
AAAGTTAATG ACAGTCTTGC AAATTACGAG GCATCATTAT CTGCACAACT GCAAACTAAG 
ATGACAGACT ATGAAACTAA GTACAAAGCT TTTGATGCTG CTCAAGCAAC GATGTCTGAT 
GCTATGAAGC AAACTAAAAG CCAAGAAATT GCTAACGTAG AGAATGATAT AATGCAGTTT 
AGAAAAAATG GTTCTCAATT GTTAAGTTTA AGAAGAGATC AACTTTTAGC GCCTTTGTAC 
CAACGTATAG GTAAAGCTTT AGATGCTGAA GCTAAAGCAC AAAACTATTC TCAGGTTTTA 
AACATAGGTT CTGGAGCATT AGGCTATGCC GATCCAAAAT TTGATGTTAC AGAAGCTGTA 
ATGAAACGTA TGGGAGTTAC TATTAAACAA CAGCAACCGC AAGGACAGAA TTAA 

 

Protein sequence

MKNILLAAFF IVTTTVSMAQ SKVGTVDVDF ILTNMTDELK KVNDSLANYE ASLSAQLQTK 
MTDYETKYKA FDAAQATMSD AMKQTKSQEI ANVENDIMQF RKNGSQLLSL RRDQLLAPLY 
QRIGKALDAE AKAQNYSQVL NIGSGALGYA DPKFDVTEAV MKRMGVTIKQ QQPQGQN