| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CA2559_06380 |
|---|
| Symbol | |
|---|
| ID | 9296772 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Croceibacter atlanticus HTCC2559 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014230 |
|---|
| Strand | - |
|---|
| Start bp | 1423158 |
|---|
| End bp | 1424351 |
|---|
| Gene Length | 1194 bp |
|---|
| Protein Length | 397 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | |
|---|
| Product | tryptophan synthase beta chain |
|---|
| Protein accession | YP_003716038 |
|---|
| Protein GI | 298207859 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.211017 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAATAA CACAATCTTA CCAAGTAAAC GAAAAAGGCT ATTATGGCGA TTTTGGTGGT
GCCTATATTC CAGAAATGCT ATATCCCAAT GTAGAAGAGT TACGCTCTCA ATATCTTAAG
ATTATGGATG ATGCCGACTT TAAAGCAGAG TTTAAAAAAC TGCTTAAAGA TTATGTGGGC
AGGCCAACAC CTTTATATTT TGCAGAGCGC CTTTCTAAGC ATTACAACAC AAAGATTTAT
TTAAAACGTG AAGATTTGTG TCATACAGGA GCTCACAAGG TAAACAATAC TATTGGGCAA
ATCCTTATGG CTAAACGTTT GGGTAAACAT AGGATTATTG CAGAAACCGG TGCCGGACAA
CATGGTGTGG CAACAGCTAC CGTTTGTGCA CTTATGGGGT TGGAGTGTAT TGTATATATG
GGCGCTATAG ATATTGAGCG CCAAGCACCA AATGTGGCAC GTATGAAAAT GTTGGGCGCT
ACGGTAATAC CAGCAGAGTC TGGCAGCAAA ACCTTAAAAG ATGCCACAAA TGAAGCCATA
AGAGATTGGA TTAACAATCC TACAGATACA CATTATATTA TAGGATCTGT AGTTGGACCA
CACCCATATC CAGATATGGT GGCACGTTTT CAAAGTGTGA TATCTGCAGA AACCAGGTTA
CAGTTACAGG AAAAAGAAGG TACAGAATTG CCAGATCACG TTGTTGCTTG TGTAGGTGGT
GGTAGTAATG CGGCAGGATT ATATTATAAC TTTTTAGATG AGCCTAGTGT AAATATTATA
GCTGTTGAAG CTGCTGGAAA AGGAGTAAAT TCTGGAGAAA GCGCCGCAAC ATCTGCCTTA
GGTAAAGAAG GCATTATACA CGGAAGCAAA ACACTTTTAA TGCAAACCGA TGATGGGCAA
ATTACTGAAC CCTACTCTAT TTCTGCAGGC TTAGATTATC CTGGCGTTGG ACCAATGCAC
GCTCATTTAT ATAAAAGTGG CCGAGCAGAA TTTATTAGCG TTACAGATGA AGCTGCTATG
AAAGCAGGTT TGTTTCTTTC TAAAACCGAA GGCATAATAC CAGCTATTGA AACCTCTCAC
GCACTTTCTA TTTTTGAAAC TAGAGCCTTT AAGCCCGATG AGATTGTTGT GGTAAACTTA
AGTGGTCGTG GTGATAAAGA CTTAAATACC TATATAGATT ATTTTGGCTA TTAA
|
|---|
| Protein sequence | MTITQSYQVN EKGYYGDFGG AYIPEMLYPN VEELRSQYLK IMDDADFKAE FKKLLKDYVG
RPTPLYFAER LSKHYNTKIY LKREDLCHTG AHKVNNTIGQ ILMAKRLGKH RIIAETGAGQ
HGVATATVCA LMGLECIVYM GAIDIERQAP NVARMKMLGA TVIPAESGSK TLKDATNEAI
RDWINNPTDT HYIIGSVVGP HPYPDMVARF QSVISAETRL QLQEKEGTEL PDHVVACVGG
GSNAAGLYYN FLDEPSVNII AVEAAGKGVN SGESAATSAL GKEGIIHGSK TLLMQTDDGQ
ITEPYSISAG LDYPGVGPMH AHLYKSGRAE FISVTDEAAM KAGLFLSKTE GIIPAIETSH
ALSIFETRAF KPDEIVVVNL SGRGDKDLNT YIDYFGY
|
|---|
| |