| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CA2559_04845 |
|---|
| Symbol | |
|---|
| ID | 9296459 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Croceibacter atlanticus HTCC2559 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014230 |
|---|
| Strand | + |
|---|
| Start bp | 1100523 |
|---|
| End bp | 1101629 |
|---|
| Gene Length | 1107 bp |
|---|
| Protein Length | 368 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | |
|---|
| Product | oligopeptide ABC transporter permease |
|---|
| Protein accession | YP_003715733 |
|---|
| Protein GI | 298207554 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.279335 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAACG CCAATTCATT ATCTCAACTC GCGCTCCAAA AATTTAAAAA AAACTTTTGG
GGCGTTTTGA GTTTCTGGTT TGTTGTCTTG GGAGTATTAC TTGCAATATT TGCTTATGCA
TTAGCACCAG ATAATTCTCA AAATGCTAAT CAACAACATA TTTCAATTCA CTCTAAGAAG
CCAGGATTTA AGGCTACTAT TCTTACCATA CCATCAAAAT TAGAGCAAGA ACAATCTTTT
TTGGATAAAC TCTTATTTGG TAAGGAAGAC AATTCTACAG AGTTACCTAT TGTAGATTAT
AAGTTTGAGG GAGAATCAAT AATTGTAACA CCTTATACAG ATGAAAGCAT TAAAGGTTTG
CCTAAAACCT ATTCTTTTGC ATCTTTTCCC AAAGGCTTAA CTAAAACCGA AATCGAATCT
CAATTTATAA ATGAACAAAC ATTTTTATTA GGAACAGATA AGTATGGTAG AGATTTACTA
AGCAGAATGC TAGTAGGTAT TCGTATTTCA CTATCTATTG GTTTTGTAGC AGTATTTATC
TCGTTGTTAA TAGGAATAAG TTTGGGAGCA CTTGCAGGGT TTTACGGTGG TAAGATAGAT
GCAGCTATCA TGTGGCTTAT AAATGTAACG TGGTCTATAC CTACTTTACT ATTAGTAATA
GCCATTACAT TGGCTTTAGG TAAGGGATTT TGGCAAGTGT TTATTGCAGT AGGTTTAACT
ATGTGGGTAG AGGTTGCAAG AGTTGTTCGT GGCCAAGTAA TGAGCGTAAA AAATATGCAA
TATGTAACTG CAGCACGTGC TTTAGGTTTT ACAAATGGTA GAATAATTGT AAAACACATC
TTACCAAATA TTTTAGCACC AGTAATTGTA ATCTCTGCAG CTAATTTTGC TGCTGCAATA
TTAATTGAAA GTGGTCTTAG TTTTTTAGGT ATAGGAGCAC AACCTCCAAT GCCAAGTTGG
GGAGCAATGA TAAAAGACCA TTACAGTTAT ATAATTTTAG GTAAAGCTTA CCTGGCAATT
ATACCTGGCT TGGGTATAAT GAGCTTAGTA ATGGCATTTA TGCTAATAGG TAACGCTCTT
AGAGATGCGT TAGACGTTAA GAGTTAA
|
|---|
| Protein sequence | MANANSLSQL ALQKFKKNFW GVLSFWFVVL GVLLAIFAYA LAPDNSQNAN QQHISIHSKK
PGFKATILTI PSKLEQEQSF LDKLLFGKED NSTELPIVDY KFEGESIIVT PYTDESIKGL
PKTYSFASFP KGLTKTEIES QFINEQTFLL GTDKYGRDLL SRMLVGIRIS LSIGFVAVFI
SLLIGISLGA LAGFYGGKID AAIMWLINVT WSIPTLLLVI AITLALGKGF WQVFIAVGLT
MWVEVARVVR GQVMSVKNMQ YVTAARALGF TNGRIIVKHI LPNILAPVIV ISAANFAAAI
LIESGLSFLG IGAQPPMPSW GAMIKDHYSY IILGKAYLAI IPGLGIMSLV MAFMLIGNAL
RDALDVKS
|
|---|
| |