Gene CA2559_04550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCA2559_04550 
Symbol 
ID9296400 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCroceibacter atlanticus HTCC2559 
KingdomBacteria 
Replicon accessionNC_014230 
Strand+ 
Start bp1034958 
End bp1035674 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content36% 
IMG OID 
Productputative tRNA pseudouridine synthase 
Protein accessionYP_003715674 
Protein GI298207495 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTCAAA GTCAATTTTC TGCAGAAAAA TTTAAAGAAG GTCAAGTTCT TTTACTTGAT 
AAACCCTTAG AGTGGACCTC TTTTCAAGTG GTGAACAAAG TGCGTTGGAT GATTAGAAAA 
TCCTGCGATA TTAAAAAGAT AAAAGTAGGT CATGCAGGAA CGTTAGATCC ATTAGCAACG 
GGATTGCTAC TTATCTGTAC TGGAAAGTTT ACCAAAACCA TTAATGAGTT AATGGGACAG 
GAAAAAGAAT ATACTGGCAC AATTACTTTA GGTGCAACCA CTCCTAGTTA TGATCTTGAA 
ACAGTGGTTA ATGAAAACTT TGATATATCT CACATCACGG CAGATTTAAT ACACAACACT 
ACAGCCCAAT TTACCGGTGA TATTTTACAA CAGCCACCTA TATTTTCAGC ATTAAAAAAA 
GATGGCGTTC GTCTTTACGA ACACGCGAGA AAAGGTGAAA CTGTGGATAT TCCTAAAAGG 
CAAGTACATA TTTCAGCATT CGAAATAACC AATATCGATA TGCCAAATGT AGAGTTTAGA 
GTAACGTGTA GTAAAGGGAC TTATATTAGG AGCTTGGCTA ATGATTTTGG AAAGGCATTA 
CAATCTGGAG GACATCTTAG TGTGTTAAGA CGTACTAAAA TAGGGGACTT TAACGTTAAT 
GACGCGTTAA AAATAGAAGA TTTTGCACGG TTATTGCCTG ATTTTGAGGA GAATTAG
 
Protein sequence
MSQSQFSAEK FKEGQVLLLD KPLEWTSFQV VNKVRWMIRK SCDIKKIKVG HAGTLDPLAT 
GLLLICTGKF TKTINELMGQ EKEYTGTITL GATTPSYDLE TVVNENFDIS HITADLIHNT 
TAQFTGDILQ QPPIFSALKK DGVRLYEHAR KGETVDIPKR QVHISAFEIT NIDMPNVEFR 
VTCSKGTYIR SLANDFGKAL QSGGHLSVLR RTKIGDFNVN DALKIEDFAR LLPDFEEN