Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CA2559_04350 |
Symbol | |
ID | 9296360 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Croceibacter atlanticus HTCC2559 |
Kingdom | Bacteria |
Replicon accession | NC_014230 |
Strand | + |
Start bp | 989494 |
End bp | 990741 |
Gene Length | 1248 bp |
Protein Length | 415 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | |
Product | outer membrane protein P1, putative |
Protein accession | YP_003715634 |
Protein GI | 298207455 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0256286 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAT TATTAACGCT TGCTGTATTT ACCTTGGCAA TGGCATCTGT ATATGCAGGT GGTTATCGAG TAAGCTTACA GGGACAACGT GCCTTGGCTA TGGGACACAC AGGTGTCGCT GTTGTAAACT CAGCAGAATT GGCATTTTTT AATCCTGCAG GTTTAGTTTA TTTAGAAAAT AAGCTAAACG TATCTGTCGG TGGTTTTGGT GTCTTTTCAG ATGTAACTTA TCAAAACACA GAATTTGGAA CGTCTTCTCA AACAGACAGT CCAGTAGGAA CACCTCTTTA TCTTTATGCT TCTTATAAAG TGACAGATTG GTTTACAGCC GGTTTAGCTG TTTATACACC TTATGGTAGT ACTGTAGAGT GGCCAACAGA TTGGTCTGGA TCTCATCTGG TAAACAGAAT AGACCTTCAG GCTATTTACA TTCAGCCTTT AGCATCATTT AAGATTAATG ATATCTTGAG TATTGGTGGT GGTCCAATTT ATGTAACTGG TGCAGTTGAG TTTAATAGAA ACATTAACAG AACTCTTACA GACGAACAAG GTGTAAGATC TAATGTTACG ATAGAAGATT CTGGAGTTTC AGAATGGGGA TATAGTGTAA GTGCTATGTT TACTCCAACA GAAAAATTAA GAGTAGGTTT TAACTATAGA AGTGAGATAA TTCTTGATTC TACAGAAGGA ACAGCAACGT TCTCAAACTT CCCTAACTCT CCAGCAGTAC CAGCAAATGG TGACCAAGGC TTTTCTGCAA GTCTTCCTTT GCCAGCAGAA TTAACTGTAG GTGTATCTTA TGAATTCTGT GATAAATTTA CTTTTGCTTT TGATTATAAC AGAGCTTTCT GGGATGTATA CAATAATTTA GATATTCAAT TTGAAGATGG TAACGAATCT TTAAACCCAA GAAACTACGA AAACGCAAAT ATTTGGAGAT TTGGTCTTCA GTATGATGCT ACTGAGAAAA TCACTTTAAG AGGTGGTTAC TATTTTGATG AGTCTCCTGT TCAAGAAGGC TATTTTGCTC CAGAGACGCC AAGAAACGAC TCTCACGGAT TTACTGGTGG TTTATCTTTC CAGGTAACGC CTAGCTTAGC AATAGATGCT TCTTTCTTAT ATGTACGATT TGAAGAGGTA GATGCTTCTT ACGATTTTTA TCAAGAAAAT GGACAGAATG TGCCATTTGA AGGAACATAT AAATCTAGCG CGTTCTCACC AGGTTTAGGT GTAACATACA AACTATAA
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Protein sequence | MKKLLTLAVF TLAMASVYAG GYRVSLQGQR ALAMGHTGVA VVNSAELAFF NPAGLVYLEN KLNVSVGGFG VFSDVTYQNT EFGTSSQTDS PVGTPLYLYA SYKVTDWFTA GLAVYTPYGS TVEWPTDWSG SHLVNRIDLQ AIYIQPLASF KINDILSIGG GPIYVTGAVE FNRNINRTLT DEQGVRSNVT IEDSGVSEWG YSVSAMFTPT EKLRVGFNYR SEIILDSTEG TATFSNFPNS PAVPANGDQG FSASLPLPAE LTVGVSYEFC DKFTFAFDYN RAFWDVYNNL DIQFEDGNES LNPRNYENAN IWRFGLQYDA TEKITLRGGY YFDESPVQEG YFAPETPRND SHGFTGGLSF QVTPSLAIDA SFLYVRFEEV DASYDFYQEN GQNVPFEGTY KSSAFSPGLG VTYKL
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