Gene CA2559_01960 details

Gene Information

• Locus tag: CA2559_01960
• ID: 9295877
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Croceibacter atlanticus HTCC2559
• Kingdom: Bacteria
• Replicon accession: NC_014230
• Strand: -
• Start bp: 482558
• End bp: 486055
• Gene Length: 3498 bp
• Protein Length: 1165 aa
• Translation table: 11
• GC content: 34%
• Product: multidrug resistance protein, putative
• Protein accession: YP_003715158
• Protein GI: 298206979

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCAGTA ATAAAGCACA AAAAAATGCC GATAAGGAGT TTGGCATGTC GTCTTGGGCA 
ATAGACAGTA AAACTACCAT CTGGGTAATG ATTGCCATTT TTCTTGCTCT AGGTGTTTCA 
GCATACTTTA CGCTTCCTAG AGAAAGTTTT CCAGAAATTG AAGAAACCAA AGTATACATA 
AGCACGCCTT ATCCAGGAAA TACAGCAGAA GACATAGAGC GTCTCATTGT GGATCCTTTA 
GAGGATAGAT TAAAAAACGT GAGTAATGTT GTCGAAATCA TTTCAACAGC TCAAGAAGAT 
TATGCTATAA TTACTGTAGA GTTTGATGAA GAGATTACTG TTGAGCAAGC TAAAACTAAG 
GTAAAGGATG AGGTAGATGC AGAAAAAGCA AGTGAAGACT GGCCAACGTT TAATGATGCT 
AAAGTAGAGC CTAATGTTTT CGATTTAAAT ATAGCTGAAG AAACACCAAT CCTTAATATT 
AATATTGAAG GTGATTATCA GGTAGAGCAA CTTAAGGAAT ATGCAGAATA CTTAGAAGAT 
GAAATTGAAG ACTTGCCGCA AATTAAGCAA GTAGACATTA GAGGTGCTCA AGAGAAAGAG 
GTTGAGGTAG CTGTAGATAT TTATAAAATG ATGGCTGCCC AAGTTAGTTT TGATGATATA 
TTAAACGCTA TTCGTGGTGG TAATATGACC ATTAGTGCTG GTAACCTAAT AAAAAGTGGA 
CAGCGCCGTA CTATTAGAGT TTTAGGTGAA ATACAGTCTC CAGAACAACT TAATAATTTT 
GTTGTAAAAT CTCAAAATGG AGCAGTTTAC CTTAAAAACA TAGCTAATGT AACGTTTAAG 
GAAGAAGATA ATACCACCTA TGCTAGAGAG TTTGGAGAGA GTGTAGTTAT GCTAGACGTT 
AAAAAACGCT CTGGAAAAAA TATGGTCGAA GCTGTAGACC AAATTAAAGT TATTGTTGAA 
GAGACAAAAG CAAATGTATT TCCACCAGAT TTAAAGGTGA CATTAGCTAA TGATCAATCT 
GAGAAAACAA TTAACCAAGT AGATGACCTT GTAAACAATA TCATCTTTGG TATTATACTA 
GTAGTTACAG TATTAATGTT TTTCCTAGGG TTTAGAAATG CACTTTTTGT TGGGTTTGCA 
ATTCCTATGT CTATGTTTAT TGCATTCTTT ATCCTTCAGC TATTAGGATA TACTATGAAT 
ACCATGATTC TTTTCGCATT AATTATGGGG CTAGGTATGA TGGTAGATAA TGGTATTGTG 
GTAGTAGAAA ACGTATACCG TCTTATGGAT GAAGAAGGTA TGAGCCGTAT TGAAGCTGCT 
AAAAAAGGTA TTGGAGAAAT TGCTGTGCCA ATTATCATTT CTACATTAAC TACTGTTGCA 
GCATTTGTTC CGTTAGGAAT GTGGCCAGGC GTTATGGGAG AGTTCATGAA ATATTTCCCT 
ATTACTTTAT CTATAGTACT AGGCTCGTCT TTATTTGTGG CAATTTTCAT GAACTCCATG 
TTAGTGTCTC AGTTTATGAG TACAGATGAA AAGATAATCT CAAAGAAATC ACTAAGAAGA 
ATTACGTTTA TTGGGTTGCC GTTAGGATTG CTTGTATTTT TTGTTGGAGG TCCAGTAAGA 
GGTTTAGGTA CATTAATGAT TGTGACTATT ATCTTGCTTT GGTTATATAA GTTCTTTATT 
AAAGGTTGGG CTATAAACTT TCAACGTAAA ACCTTAGTAG CTTTAGAAAA TAGATACAAG 
AGGTTTTTAC AGTACGCCTT AAAAGGGCGT AGAGCTTGGG CATTTGCTGC AGGTACTTTT 
GGCTTGTTGT TTATTGTATT TATACTATTT GGAATATCTG TAGGAAGTGG TAGAACAAGT 
ATTGAGTTCT TTCCTGATAA TAAGCCTAAC CAAATTATAG TATATATAGA ATATCCTGAA 
GGAACAGATA TCAAAAAAAC TAATGAGATA GCTAAGGATA TTGAAGAGCG TGTATATGCA 
GTACTGCAAG ATGACATGTA TATGGAAGAC GGCAGAAATT ATATGGTAGA GTCTGCTGTA 
TCTCAAGTTG GAGAAGGAGC AGGTAACCCT CAAACAGATG GTGGTAATAG TGCAGAAATG 
CCACATAGGG CAAAAATTAC TGCAACTATG CGAGAGTATA AGTTTAGAAA AGGTAAAGAT 
TCTGAAGTCT TAAGACAGAA GGTTCAGGAT ACATTAGAAG GTGTATATCC TGGTGTTGCT 
ATTTCTGTTG AAAAAGACTC AAATGGACCA CCTGCAGGTT ACCCAATTAA CATTGAGCTA 
GAAGGACCAG ATTACGATGA GCTAATCTTA GTGGCAGAAC AAATGAAGAA TTTCATTAAT 
GCTTCAAATA TAGAAGGTAT AGCAGAGCTT AAGATAGATG TAAACCGAAG CAAGCCTGCT 
ATGCAAGTTG TAGTAGATAG AGAGAAAGCA GGAGAGCTTG GTGTTACAAC AGGACAAGTT 
GGTAACCAGT TAAGACGTTC TATTTTTGGA GATAAAGCTG GTGTTTATAA AAAGGATGGA 
GAAGATTATG ATATCTATGT GAGGTTTAAT GAAGATAATA GATATAATAC TAGTGCTTTA 
TTCAATCAAA ATATAACATT TAGAGATCCT GCAACAGGGC AAATTAAGGA AATTCCAATT 
TCTGCAGTTG CTAAACAAAA AAACACATCA TCTTTTAGTG CGATTAAACA CAGAGATGCA 
GAACGTGTGG TTACAGTTTA CTCTGCATTA GAACCTGGTT ATACAGATGC TGCAGCTATT 
GTTGCGCAAA TACAGGAGAA GATGAAAGAG TTTCAGGATT TGCCACAAGA AATTAAAATT 
GATTATACAG GGCAGATAGA AGAACAAAAT AAACAAATGG CATTTTTAAT GAGTGCGTTC 
TTTTCTGGAC TGGGATTAAT TATGTTAATC CTTGTATTCC AATTTGGATC AATTTCAAAA 
CCAACAATAA TTATGATTGC TATATTCCTA AGTTTAATAG GAGTGTTTGG CGGTATAATT 
ATAACTGGAG CATCTTTCGT AATAATGATG ACTATGATGG GGATAATTTC ATTAGCAGGA 
ATTGTTGTAA ATAATGGCGT AGTATTATTA GATTATATCC AGATTCTTAT AGATAGGCGC 
ATGGTAAAAT TAGGTATGAG TGATGGAGAT TTATTACCTA GAGAAGAAAT GACAGATATA 
ATTATTGAAG CTGGTCGTGC AAGATTAAGA CCTGTACTAT TAACAGCAAT AACTACTGTA 
TTAGGTTTAA TTCCATTAGC TATTGGTTTA AATATAGATT TCTTTGGCTT ATTTGGTAGT 
CTAAATCCTG ATGTATATAT GGGTGGAGAT AACGTTATAT TCTGGGGTCC ATTGGCAAAA 
TCTGTAATAT ATGGACTTAT TGTTGCTACC TTCTTAACAC TAATTATAGT ACCAGTATTA 
TTTTATCTAG TACATAGAAA TAAGCTTAGG TTTAGAAAGC GTTTTAATAA AGAAAAGCTT 
CACGATATAC ATCAATAA 

 

Protein sequence

MSSNKAQKNA DKEFGMSSWA IDSKTTIWVM IAIFLALGVS AYFTLPRESF PEIEETKVYI 
STPYPGNTAE DIERLIVDPL EDRLKNVSNV VEIISTAQED YAIITVEFDE EITVEQAKTK 
VKDEVDAEKA SEDWPTFNDA KVEPNVFDLN IAEETPILNI NIEGDYQVEQ LKEYAEYLED 
EIEDLPQIKQ VDIRGAQEKE VEVAVDIYKM MAAQVSFDDI LNAIRGGNMT ISAGNLIKSG 
QRRTIRVLGE IQSPEQLNNF VVKSQNGAVY LKNIANVTFK EEDNTTYARE FGESVVMLDV 
KKRSGKNMVE AVDQIKVIVE ETKANVFPPD LKVTLANDQS EKTINQVDDL VNNIIFGIIL 
VVTVLMFFLG FRNALFVGFA IPMSMFIAFF ILQLLGYTMN TMILFALIMG LGMMVDNGIV 
VVENVYRLMD EEGMSRIEAA KKGIGEIAVP IIISTLTTVA AFVPLGMWPG VMGEFMKYFP 
ITLSIVLGSS LFVAIFMNSM LVSQFMSTDE KIISKKSLRR ITFIGLPLGL LVFFVGGPVR 
GLGTLMIVTI ILLWLYKFFI KGWAINFQRK TLVALENRYK RFLQYALKGR RAWAFAAGTF 
GLLFIVFILF GISVGSGRTS IEFFPDNKPN QIIVYIEYPE GTDIKKTNEI AKDIEERVYA 
VLQDDMYMED GRNYMVESAV SQVGEGAGNP QTDGGNSAEM PHRAKITATM REYKFRKGKD 
SEVLRQKVQD TLEGVYPGVA ISVEKDSNGP PAGYPINIEL EGPDYDELIL VAEQMKNFIN 
ASNIEGIAEL KIDVNRSKPA MQVVVDREKA GELGVTTGQV GNQLRRSIFG DKAGVYKKDG 
EDYDIYVRFN EDNRYNTSAL FNQNITFRDP ATGQIKEIPI SAVAKQKNTS SFSAIKHRDA 
ERVVTVYSAL EPGYTDAAAI VAQIQEKMKE FQDLPQEIKI DYTGQIEEQN KQMAFLMSAF 
FSGLGLIMLI LVFQFGSISK PTIIMIAIFL SLIGVFGGII ITGASFVIMM TMMGIISLAG 
IVVNNGVVLL DYIQILIDRR MVKLGMSDGD LLPREEMTDI IIEAGRARLR PVLLTAITTV 
LGLIPLAIGL NIDFFGLFGS LNPDVYMGGD NVIFWGPLAK SVIYGLIVAT FLTLIIVPVL 
FYLVHRNKLR FRKRFNKEKL HDIHQ