| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mesil_3280 |
|---|
| Symbol | |
|---|
| ID | 9252810 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Meiothermus silvanus DSM 9946 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014213 |
|---|
| Strand | + |
|---|
| Start bp | 71256 |
|---|
| End bp | 72074 |
|---|
| Gene Length | 819 bp |
|---|
| Protein Length | 272 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | SL44-1; basic proline-rich protein |
|---|
| Protein accession | YP_003686602 |
|---|
| Protein GI | 297567631 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0087795 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0783046 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAGGG CCCTGCGGGA CGTAACCTTG CGGGATGGCC TCCAGGCGCT GCCCCGGATC
CTCCCCACGG AAATCAAGGT AGCCCTCTAC CGGAGGCTCC TTCGGGCGGG GGTGCAGGCC
TTCCAGGTGG CCTCCTTCGT CTCCCCCAAG CGCCTCCCCC AGATGGCCGA CGCCGAAGCG
GTCTGGGAAG CCCTGAGGCC CCTAGGGGGG GTACGGGACG CCCTCATCCT CAACCTCAGG
GGCTACGAGC GGGCCCGAGC CCTGGGGGTG GACCGGCTAG AGATGGTCCT CTCCCTTTCC
GAGGCTTACG AGAGGCGAAA CGCCGGGAGG GGCCTCGAGG AGGCCTGGGG CGAGCTGGGC
GAGGTGGCAA AGCGGGCAGC CCAGGAGGGG GTCCACCTGG AGGTGGGATT GGCCTACGCT
TGGGGCGGGG AGGCCTCCGA GGACGAGGTT CTGCGGGCCG CCGAGCGGGC GGTGGGGCTC
GGGGCGGGGG CCTTGGGCTT GGCCGACACC ACGGGCCGGG CCCGCCCCGA GGCTGTTCAC
CGCCTGGTCC TCCGGGTGCG GGAGGCTCTC CCCCACCTTC CCCTCCGCGT CCACCTCCAC
GAGGGGGGTC TGGGGTTGGA GAACGCCCGG GCGGCCCTGG AGGCCGGGGC CACCGCCCTG
GACGCCACCC TGGGGGGCCT GGGGGGGAGC CCCTTCGCTG GGGAGGTAGG GGGGAACCTG
GCCTGGGAGC GCCTCGCGGA GGCGGGCCTG GCCCCCCTGG ACCGACAGGT CCTTGAAGAG
GCCTGGACCT GGCTGGAGCA GGACCTAGGG CATGGCTAG
|
|---|
| Protein sequence | MARALRDVTL RDGLQALPRI LPTEIKVALY RRLLRAGVQA FQVASFVSPK RLPQMADAEA
VWEALRPLGG VRDALILNLR GYERARALGV DRLEMVLSLS EAYERRNAGR GLEEAWGELG
EVAKRAAQEG VHLEVGLAYA WGGEASEDEV LRAAERAVGL GAGALGLADT TGRARPEAVH
RLVLRVREAL PHLPLRVHLH EGGLGLENAR AALEAGATAL DATLGGLGGS PFAGEVGGNL
AWERLAEAGL APLDRQVLEE AWTWLEQDLG HG
|
|---|
| |