| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mesil_3078 |
|---|
| Symbol | |
|---|
| ID | 9252601 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Meiothermus silvanus DSM 9946 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014212 |
|---|
| Strand | - |
|---|
| Start bp | 3122991 |
|---|
| End bp | 3124034 |
|---|
| Gene Length | 1044 bp |
|---|
| Protein Length | 347 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | |
|---|
| Product | transport system permease protein |
|---|
| Protein accession | YP_003686420 |
|---|
| Protein GI | 297567448 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0306769 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.447072 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATCAACG CCGAACGCCA GCAGCACTCG CCGCGAGGCC ACGCGCGGGC TTGGGTGTTC
CTGGGGTTAG TGGGTTTGCT GGGCTTGGCC CTGGTGCTCG GGGTAGGGCA GGGGGCGGTG
TACGTTTCCC CCAACGAGAT ACTACGCGCC CTCGTTGGAG CTGAGGACAA CCCCATCGTG
ACCGATCTGA GGCTGCCGCG GGTGCTGGGG GCGATGGGGG TAGGGGCAGC TTTGGGGCTG
GCTGGGGCAG CCTTCCAGGG GCTATTTAGA AACCCCCTAG CCGACCCTTA CCTGATGGGC
TCAGCCGCGG GCGCGGCCTT CGGGGTGACG CTGGCGGTGA GCCTGGCCGG GACCCTGAGC
GCGGCCTACT CGAGCAGCCA GGTCTTCGCC GCTTTGCCCA GCTATGTGAC CCTTGTTGCC
TTCGTCGGGG CGGTGTTGGC GGTTGCCCTG ACCCTGGTGC TCTCCGGCGG GGCTTCGCGC
ACCCACGACC TGATTCTGGC CGGGGTGGTG GTGGGCGCGG TGCTGACCGG GCTCACCACC
TACCTGATGC TCAAGGACGC CGACCGCATC CGTGCGGTAA TGGCCTACAC CCTGGGCAAC
CTCAGCTTCA TGGGCTGGGA GGGGGTGCGG GCGATGGCCC TTTACCTGGT GCTTTCGTTG
CCGTTCCTAT GGATTTTGGG GCGCACCCTC AACGCGCTCA GCCTGGGCGA GGAGACCGCC
CGCAGCCTGG GGCTTCCCCT CCTGGGTCTC AAACTCCTGG TGATTGGCCT GGCGACGTTG
CTTACAGCGG CCTCGGTAGC TTATGCCGGG ATCATCGGCT TTGTGGGGCT GGTAGCGCCC
CATGCCCTGC GGCGGCTGGT GGGTGGGGAT TACCGGGTGC TGCTTCCCGC TTCGGCGCTG
GGCGGTGCGG TGCTGCTCAC CTCTGCGGAC CTATTGGCTC GAGTCCTGAC CCGCCCGGCC
GAACTCCCGG TAGGGGTGGT GACGACGATG TTGGGCGGGC CGTTTTTCCT GTATTTGCTG
TGGAGGGGAA GACGAAATGT CTAA
|
|---|
| Protein sequence | MINAERQQHS PRGHARAWVF LGLVGLLGLA LVLGVGQGAV YVSPNEILRA LVGAEDNPIV
TDLRLPRVLG AMGVGAALGL AGAAFQGLFR NPLADPYLMG SAAGAAFGVT LAVSLAGTLS
AAYSSSQVFA ALPSYVTLVA FVGAVLAVAL TLVLSGGASR THDLILAGVV VGAVLTGLTT
YLMLKDADRI RAVMAYTLGN LSFMGWEGVR AMALYLVLSL PFLWILGRTL NALSLGEETA
RSLGLPLLGL KLLVIGLATL LTAASVAYAG IIGFVGLVAP HALRRLVGGD YRVLLPASAL
GGAVLLTSAD LLARVLTRPA ELPVGVVTTM LGGPFFLYLL WRGRRNV
|
|---|
| |