| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mesil_1351 |
|---|
| Symbol | |
|---|
| ID | 9250847 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Meiothermus silvanus DSM 9946 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014212 |
|---|
| Strand | + |
|---|
| Start bp | 1335566 |
|---|
| End bp | 1336816 |
|---|
| Gene Length | 1251 bp |
|---|
| Protein Length | 416 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | |
|---|
| Product | integrase family protein |
|---|
| Protein accession | YP_003684752 |
|---|
| Protein GI | 297565780 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAGTA GAAAACGCCC TTTGGAGAAG CGCCCCCATG GATCAGGCAC CAAGCCCACC
AAGCGCGGGC ACCAGTGGAC GATGCAAGTC ACCCTGGGAC GCCGCGCGGA TGGGAAGCTC
GACCGCCGCC GGGTGTTCGG GCTGACCCCC GAGGACTGCT TGCAGAAAGC CCGCGAGCTT
CAGGTAGCCG CTGCCCAAGG GATGCTCGCT ACCCACGAGC GCACGACGGT TGCAGAGTGG
TTGGGGATAT GGCTCGGAGG TAAAGCCACC CAAGCCGCCC CCACTTACCG GCTCAAACTC
GAGGCCCACG CCAAGCACAT TACCCAACAT TTGGGGAGCA TGGAGCTTCG CAAGCTGAGG
CCTGGGCACG TTCACACCTT CGCCCGCGCC CTGGAGGCTA AGGGGTTAGC CCCTTCCTAC
CGCCGTGAGG TGCTGAGCAC CCTCGAGGCC GCCCTTGAAC GTGCCGTGGT CATGGAGCTC
ATCCCGCGCA ACGTAGCCCG CCCGGTGAAG CTCGAGGCCG CCCCCGCGAC CCGCAAGGTC
AAAGCCTGGG ACGCCGCGAC CGTGGCCCGT TTCCTCGAGG TGGCCCGCCC CTACCGGCTG
TATCCGCTGT TCTATCTGGG GTTTGCCACC GGCCTGAGGC GAGAGGAGCT GCTAGGGTTG
CGTTGGGTGG ACATAGACCT AGAGGCCCGC ACCCTGCGGG TGGAGCAGAC CCTAACCCCG
GACAAGGGCG GTGTCCACAT CGGCCCGCCC AAGACCCGCA CCAGCCGCCG GGTGGTGGGC
TTCGGGCCGG ACGTGGCCGC CGTGCTGGAG GAATGGCGGG CCAAGCTAGC CGAAGAGCGC
CGCATCCTGG GGAAGGAGTG GTACGATTCG GGGTTGGTGT TCCCCTCGAG CACCGGCCAC
CCCCTGCACC CGCGCAACGT GAACCGGGAC ATGGGCCAGA TCATCAAGAC CCACAACCGC
AAGCGGGTCA AGGAGATTCG GAGGGCCATG CAGGGACAGC CCGAAGAGGA AATAAAGCGG
GCCATTGAAG AGGTCATGCT CCCCCACCTG AGCCCGCACA TGATGCGCCA TACCCACGCC
ACGCTACTCG CGCAAAAGAC CCGGCAAATC GAGCTGGTGA GCCGCCGCCT GGGGCACTCC
CGCCCCTCCG TCACGCTCGA CATTTACCGC CACATCGCGA CGTGGGAGCT TGAAGAGGTG
GCCCTACCCC TGAGCGAGCT GCTGAACCCT ACCCCCCGCA CCCTGAACTG A
|
|---|
| Protein sequence | MASRKRPLEK RPHGSGTKPT KRGHQWTMQV TLGRRADGKL DRRRVFGLTP EDCLQKAREL
QVAAAQGMLA THERTTVAEW LGIWLGGKAT QAAPTYRLKL EAHAKHITQH LGSMELRKLR
PGHVHTFARA LEAKGLAPSY RREVLSTLEA ALERAVVMEL IPRNVARPVK LEAAPATRKV
KAWDAATVAR FLEVARPYRL YPLFYLGFAT GLRREELLGL RWVDIDLEAR TLRVEQTLTP
DKGGVHIGPP KTRTSRRVVG FGPDVAAVLE EWRAKLAEER RILGKEWYDS GLVFPSSTGH
PLHPRNVNRD MGQIIKTHNR KRVKEIRRAM QGQPEEEIKR AIEEVMLPHL SPHMMRHTHA
TLLAQKTRQI ELVSRRLGHS RPSVTLDIYR HIATWELEEV ALPLSELLNP TPRTLN
|
|---|
| |