Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mesil_1054 |
Symbol | |
ID | 9250547 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Meiothermus silvanus DSM 9946 |
Kingdom | Bacteria |
Replicon accession | NC_014212 |
Strand | - |
Start bp | 1047148 |
End bp | 1047882 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | HAD-superfamily hydrolase, subfamily IA, variant 1 |
Protein accession | YP_003684467 |
Protein GI | 297565495 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.149567 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAACCGA AAGCCATCAC TTTCGACTTC TGGGGCACGC TCTTCATGGA AAACCCGAGT TCTGCACAGG ATATTCTGAG TGCGCGTTAC GAGGTATTGC TCGATGCCCT CTCGGAAGCG GGTACCCCCG CCGACGAGGG GCAGGTCCGG GAGGCCTACC GGCAGGCCCA AATGGCTTTT GACGATGCCT GGAAGGCCCT TCAAGTCATG ACCGTCTATG ACCGCGTGGG CCACATCTTC AAGCTCTTGG GGGTCAAATT CGACGAGGGT TTGATCGCCC TGACTGCCCG AAAGCTCGAG GAGACCTCCC TAAGCTTCGA CCTTCTCCCC CTGCCGGGGG TCAAGGAAGC GCTGCCCCAA CTGGCTAAAA CCCACATCCT GGGCATCGTC TGCGACACCG GGGTGACCCC AGGCCGCCTG CTGCGCGAAC ACCTCCGGCG GCATGGGCTT TTGGATTACT TCACCGGGTT TTCCTTCTCT GACGAGACCG GCTCGGTCAA ACCCCGCCGC GAAGCCTTCA TGGCTGCCCT GGAGGAAATG GGCATAGAAC CGCAAAACGC CTTGCATATT GGGGATATCC CCCGCACCGA CATCGCCGGG GCCTTCGCCG CTGGCTACCC CTGGGCCGTG CAGTACACCG GCCACCGCTA CCTCAACGGC GGACCCGAGC CCACCGCGCG GGTGGGCGAT CACCGTGAGC TAATCAACCT GCTCTTTGCA CAAAAGCAGC CGTAA
|
Protein sequence | MKPKAITFDF WGTLFMENPS SAQDILSARY EVLLDALSEA GTPADEGQVR EAYRQAQMAF DDAWKALQVM TVYDRVGHIF KLLGVKFDEG LIALTARKLE ETSLSFDLLP LPGVKEALPQ LAKTHILGIV CDTGVTPGRL LREHLRRHGL LDYFTGFSFS DETGSVKPRR EAFMAALEEM GIEPQNALHI GDIPRTDIAG AFAAGYPWAV QYTGHRYLNG GPEPTARVGD HRELINLLFA QKQP
|
| |