Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mesil_0972 |
Symbol | |
ID | 9250465 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Meiothermus silvanus DSM 9946 |
Kingdom | Bacteria |
Replicon accession | NC_014212 |
Strand | + |
Start bp | 956391 |
End bp | 958325 |
Gene Length | 1935 bp |
Protein Length | 644 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | alpha amylase catalytic region |
Protein accession | YP_003684389 |
Protein GI | 297565417 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.216915 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTTCCC GACCCCTTAC CCCGGAGCAA CGTCGCATCC TTGATACGCT GAACGTTGCC GCACCGCCGA TGGACGAGAT GTTCGCGGTC CGCCTCGAGC GCCACTTCGG CGAGCTGTAC GAGGGGCTGA CCGCAGTCTA TCCCGACCCC AAGACGATGC TGGGACCCTT GCTCGAGATC ATGCGGCAGC GCTATCGCGA GCGCCCTGCA GACCTTAAAC GGCTCGATCT CGAGCGCACA CTCGCCAAGG ACTGGTTCCA ACGCCCGGAA ATGATCGGCT ACGTCTGCTA CACCGAGCGC TTCGCCGGGA GTTTCAAAGG GGTGGAAAAG AAGCTTGACT ACCTGCAATC TCTGGGCGTC ACCTACCTCC ACCTGATGCC CTTTCTGAAG CCCCGCCCGG CCCCCAACGA CGGCGGCTAC GCGGTGATGG ATTACCGCAG CGTCCGCGAA GACCTGGGGA CGATGGACGA CCTCCAGTCC CTAGCCACCA AGCTGCGCCA GGCGGGGATT TCCCTCTGCT GCGACTTGGT GCTGAACCAT GTGGCCCAGG AGCACGAGTG GGCAGTGAAA GCCCGTTTGG GTGACCCCAA GTACCAGCGC TACTTCTACA TGTTTAAAGA CCGCACCCTC CCCGACCAGT ATGAGCGCAC CCTGCCGGAG ATCTTTCCCG ATTTCGCCCC GGGCAACTTC ACCTGGGACG CACAGGCCCA GCGCTGGGTC TGGACCACCT TTAACGCCTG GCAGTGGGAC CTCAACTGGG CAAATCCAGA GGTATTCCTC GAGTTCGCCG ACCTCATCCT CTGGCTGGCC AACAAGGGCA TCGAAGTATT TCGCCTTGAC GCCATCGCCT TTATTTGGAA GCGGATGGGG ACTAACTGCC AGAACCAGCC TGAAGTCCAC GCCATCACCC AAGCGCTCCG GGCGGTGGCC CGCATCGTGG CCCCGGCGGT GCTTTTCAAG GCTGAGGCCA TCGTTGCCCC TGATGACCTC ATCCAATACC TGGGCCAGGA CGTACATTTC GGCTTGGTCT CCGACACCGC CTACCACAAC AGCCTGATGG TGCAGATCTG GTCTAGCCTG GCGAGCCGCG ACACCCGTCT GATGGCCCAG GCCCTTAGGG GGTTTCCTTC CAAGCCCTAC ACCACGGCTT GGAACACCTA CTTGCGCTGC CACGACGACA TCGGCTGGGC CATCGCCGAC GACGACGCAG CAGCGGTGGG GCTGTCGGGC GAGGCCCATC GGCGCTTCCT CTCCGATTAC TACTCGGGCC GTTTCCCGGG GTCACAGGCG CGGGGGTTGG TCTTCCAGGA AAACCCACGC ACCGGCGACC GGCGCATTTC CGGATCGGGA GCGAGCTTGG CTGGCCTCGA GCAAGCCCTC GAGCATGGCG ATATGCAAGG GGCGAATCTA GCGCTCGAGC GCCTGCTGCT GGGGCACGCC ATCGTGCTGG GCTTCGGTGG GATTCCCCTT TTGTACATGG GCGACGAACT GGCCCTCCTC AACGACTACC GCTACTTGGA AGAGCCCGAG CACGCCATGG ATAGCCGCTG GGTCCATCGG CCCCGCATGG ACTGGGCCAA GGCCCACAGG GCCCAATCCG ATCCCCACTC CATCGAAGGG CGGATGTACC ACGCTCTGCG GCATCTCATC GCGGTGCGCA AGTCTACCCC GCACTTCCAC GCTTCGATCG AGGCGGAGAT CCTCGAGCCC AAAAACCCCC ACGTCTTCGC TTATGTCCGC CGCCACCCCC TGGGGAACCT GGTTGCCCTG TACAACTTTA GTGAACAGCC GCAGTACTAC CCCCTCGGCC AGCTCGCCGA GCGCGGCCTG ACCCAGCCCT TTGACCGCAT CAGTGCCAAG AGTATAGCGG TTTCTGGGGG GTTGGTGCGG CTGGAGCCCT TCGCCCGTTT GTGGCTGACC CAGGGCGAGG GCTAA
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Protein sequence | MFSRPLTPEQ RRILDTLNVA APPMDEMFAV RLERHFGELY EGLTAVYPDP KTMLGPLLEI MRQRYRERPA DLKRLDLERT LAKDWFQRPE MIGYVCYTER FAGSFKGVEK KLDYLQSLGV TYLHLMPFLK PRPAPNDGGY AVMDYRSVRE DLGTMDDLQS LATKLRQAGI SLCCDLVLNH VAQEHEWAVK ARLGDPKYQR YFYMFKDRTL PDQYERTLPE IFPDFAPGNF TWDAQAQRWV WTTFNAWQWD LNWANPEVFL EFADLILWLA NKGIEVFRLD AIAFIWKRMG TNCQNQPEVH AITQALRAVA RIVAPAVLFK AEAIVAPDDL IQYLGQDVHF GLVSDTAYHN SLMVQIWSSL ASRDTRLMAQ ALRGFPSKPY TTAWNTYLRC HDDIGWAIAD DDAAAVGLSG EAHRRFLSDY YSGRFPGSQA RGLVFQENPR TGDRRISGSG ASLAGLEQAL EHGDMQGANL ALERLLLGHA IVLGFGGIPL LYMGDELALL NDYRYLEEPE HAMDSRWVHR PRMDWAKAHR AQSDPHSIEG RMYHALRHLI AVRKSTPHFH ASIEAEILEP KNPHVFAYVR RHPLGNLVAL YNFSEQPQYY PLGQLAERGL TQPFDRISAK SIAVSGGLVR LEPFARLWLT QGEG
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