Gene Mesil_0894 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMesil_0894 
Symbol 
ID9250386 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMeiothermus silvanus DSM 9946 
KingdomBacteria 
Replicon accessionNC_014212 
Strand
Start bp886759 
End bp887403 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content63% 
IMG OID 
Productputative transmembrane anti-sigma factor 
Protein accessionYP_003684314 
Protein GI297565342 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0679919 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0128981 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGGACC TGCGCGAACT CCTCCCCGAT TACCTGTTGG GCCAACTGAG CCTCGCAGAA 
ACTCGCGAGG TCGAGGCCTG GCTTGAGGCT TCCCCCCAGG CGCGAGCGGA GCTTGAAAGC
CTCGAGTCCG CCCTTTTCGC GCTCCCCCAG GGGCTGGTTC CAGTGAACCC ACCTCCCCAC
CTGTGGGGCG AGGTTACGAA GCGTTTACAC AGCAAACCCC TGGGCCGCTC CCGCTCCCTT
TGGGTAGGGG GGATCGCCGC AGCCTTCTTG GTGTTGGCGG GCTGGGGAAT TTTTTCCTTT
GCCAGCTACC GCGCCTTGCA GGCCGAACAG GCCCAGCTGG CGCACTGGCT TGCGCTCCCT
GCACAGTGGC ACCTTCTGAA GAACGCTGAA GGGGAGGGAA TCGGTAGCAT GATCTGGACC
AAGGACGGCG GCTGTTTGAT CGTGATGCGC GATCCTCCCC CTGCGGGAAA GGTCTACCAG
GCCTGGGGGA GTGAGAAGGG CCGTAAGGTC TCGCTGGGGA CTTTCCGCGG GCGGATTTAT
GAAACCAACT TCCTGGGCTT CGACCGCATA GGGGTGAGCC TCGAGCCCCC AGGGGGAAAC
CTTCAACCCA CCGAGCCGCT GATTTCGATC CCGATCCAGG GTTAG
 
Protein sequence
MRDLRELLPD YLLGQLSLAE TREVEAWLEA SPQARAELES LESALFALPQ GLVPVNPPPH 
LWGEVTKRLH SKPLGRSRSL WVGGIAAAFL VLAGWGIFSF ASYRALQAEQ AQLAHWLALP
AQWHLLKNAE GEGIGSMIWT KDGGCLIVMR DPPPAGKVYQ AWGSEKGRKV SLGTFRGRIY
ETNFLGFDRI GVSLEPPGGN LQPTEPLISI PIQG