Gene Mesil_0660 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMesil_0660 
Symbol 
ID9250148 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMeiothermus silvanus DSM 9946 
KingdomBacteria 
Replicon accessionNC_014212 
Strand
Start bp644296 
End bp646158 
Gene Length1863 bp 
Protein Length620 aa 
Translation table11 
GC content62% 
IMG OID 
ProductATP-dependent metalloprotease FtsH 
Protein accessionYP_003684085 
Protein GI297565113 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.464509 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.415833 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCAACGC GCATCAACCC ATGGACTTTG GTAATCCTGG TGATCGCCGG ATACTGGTTA 
TTTACCCTGT TCTCCGGCGG CAACCAGCCT ACCGTCTCGT ATAGCGATTT TAGGCGGTAT
GTGAGCGAGG GCAAGATCGC TCGGGTAATC CTGGAGGAGA ACCGCATCAC CGGGGTGTTC
AAGGTCCCCG AGCGGATCAC CACAGGCGGA GGCACTTCCA CGGTGTCTCG CTTCAGCTTG
CCCACCTTGC CCAGCAACGT TCGGGATGAC GAGCTTATCC CGCTCTTGCA ACAGAACAAC
GTCGAGGTAA TCACCCGTTC CCCCTCGATT TGGCCCCAGG TGATCGGGAT CTTTGCCCCG
GTGATCCTGC TGATGGCGTT CTTCTGGTTC TTCTTCATGC GCTCGCAAGG GGGGGCCGGG
CAGGTCATGC AATTTGGGCA GAGCCGGGCC CGGCAGTACG GCAAGGAGCG GCGGGTCTCC
ACCACCTTCA AGGACGTAGC CGGGCACACT GAGGCCAAGC GCGAGCTGAT GGAAGTCGTA
GACTTCCTCA AGAACCCTCA GAAATACATT GCCATCGGGG CGGAGATCCC CAAGGGGGTG
CTCTTGGTGG GGCCTCCCGG AACCGGGAAG ACCCTCCTTT CGCGGGCCAT TGCCGGAGAG
GCGGGGGTGC CTTTTTTCTC GGTATCGGCT TCGGAGTTCA TGGAGATGTT CGTGGGGGTA
GGGGCTAGCC GGGTGCGCTC GCTCTTCGAG GAGGCCCGCC GCAACGCCCC GGCGATCATC
TTCATCGACG AATTGGACTC CATCGGGCGC AAGCGCGGGG CGGGGATCGG GGGTGGGCAC
GACGAGCGCG AACAGACCCT TAACCAGATC CTCTCCGAGA TGGATGGCTT CGAAAAAGAC
ACCAGCGTGA TCGTGCTGGC CGCGACCAAC CGTCCGGACA TCCTGGATCC GGCGCTGTTG
CGCCCCGGGC GCTTTGACCG TGAGGTAGTG ATTGGCCTGC CTACCATGGA GGAGCGCAAA
GAAATCTTGC TAGTACATAT GCGGGGCAAA CCCATCGCCT CCGATGTGGA GGTAATGGAG
CTGGCCCAGA TCACTCCCGG GATGAGCGGA GCCGATCTCA AAAACCTGGT GAACGAAGCG
GCGTTGCAAG CAGCCCGCGA GGGGTACAAC CAGATCCACA TGAGCCACTT CCGCACTGCT
TTGGACAAGA TCATGCTGGG CCTCGAGCGC GGCACGCTCA AGCTCTCCGA GAGCGAGAAG
CGGGCGGTGG CCTACCACGA GGCGGGCCAC GCCGTCGCGG GCGAGGTATT GCCCTATGCC
GACAAAACCG AGAAGGTTTC CATCGTGCCG CGCGGGATGT CCTTAGGGGT GCGCTGGAGC
AAGCCCGAGG AGCGGGTGCT GATGAGCAAG GAACACCTCG AGGACACCCT GGCCATGACC
CTAGCGGGCC GCGCCGCTGA GGAGATCTTT ACCGGCACCA TCACCACCGG GGCGGCCAAC
GACTTCAAGC AAGCTACCCA GATGGCCAAG CAGATGGTGC TGGACTGGGG CATGGGCGAG
CACTTCAAGA ACGTGGCCTG GGGTTCTAAC AGCGGCCCTA TCTTTTTGGG AGAGGAAATC
GCCAAGAAGC AGGACCACTC CGAGGAGACG GCCCGCCTCA TTGACGAGGA CATCCGCAAG
ATTCTCGACG ATGCCTACGC CAAGGCCAAA AAGGTGCTCT CCGACCACGC CCCCGCCATG
CACAAGATCG CCGAGGAACT CCTCACCCAC GAGACCATCC TGGGCAACCG GGTGCGGGAG
ATCCTGGCCG AGGCCAAGGC CCCCCAACCC GTAGCCACGC CGACCCAGGC CCCTGAAGCT
TAG
 
Protein sequence
MPTRINPWTL VILVIAGYWL FTLFSGGNQP TVSYSDFRRY VSEGKIARVI LEENRITGVF 
KVPERITTGG GTSTVSRFSL PTLPSNVRDD ELIPLLQQNN VEVITRSPSI WPQVIGIFAP
VILLMAFFWF FFMRSQGGAG QVMQFGQSRA RQYGKERRVS TTFKDVAGHT EAKRELMEVV
DFLKNPQKYI AIGAEIPKGV LLVGPPGTGK TLLSRAIAGE AGVPFFSVSA SEFMEMFVGV
GASRVRSLFE EARRNAPAII FIDELDSIGR KRGAGIGGGH DEREQTLNQI LSEMDGFEKD
TSVIVLAATN RPDILDPALL RPGRFDREVV IGLPTMEERK EILLVHMRGK PIASDVEVME
LAQITPGMSG ADLKNLVNEA ALQAAREGYN QIHMSHFRTA LDKIMLGLER GTLKLSESEK
RAVAYHEAGH AVAGEVLPYA DKTEKVSIVP RGMSLGVRWS KPEERVLMSK EHLEDTLAMT
LAGRAAEEIF TGTITTGAAN DFKQATQMAK QMVLDWGMGE HFKNVAWGSN SGPIFLGEEI
AKKQDHSEET ARLIDEDIRK ILDDAYAKAK KVLSDHAPAM HKIAEELLTH ETILGNRVRE
ILAEAKAPQP VATPTQAPEA