Gene Mesil_0584 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMesil_0584 
Symbol 
ID9250069 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMeiothermus silvanus DSM 9946 
KingdomBacteria 
Replicon accessionNC_014212 
Strand
Start bp568774 
End bp570456 
Gene Length1683 bp 
Protein Length560 aa 
Translation table11 
GC content65% 
IMG OID 
Productputative two component transcriptional regulator, winged helix family 
Protein accessionYP_003684019 
Protein GI297565047 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000469603 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGATCTGG AAGCTGCCTG GGGTGCAGGC CAGCACCAGG AAGGGCTGGC GTGGTGCTTG 
GAGCGGCTTT GCCAGACCCC CGTCTCCGAC CCGCTGCTTT TGCGCTATGC CCTCGAGTTT
GCCCTCGAGC TCGGGCAGGA AAACGCGCTC TTTTTACAGT TCCCCCACCT AACCCACAGT
CAGCACCCAG AAGTACAGGC GCTCATGAGC CGGATCGCCT GGCAGCGCGG CCAGCTTTCC
CAGGCCCTAG AATTGGCCCA GCAAGCCTAT CAGCAAAGCC CGTGCTTCCT AACCGCTTAC
ACCCTGGCTA CAGCGGCCGT TTTGCGCAGC CCGCACGAGG CTGGGCGTTG GCTGCGCGAG
GCCTTACGGC AGGCCGAAGC CGCGGGCCAA CCGCAGCGGG CGGTTCAGGC GTCAGGCGCT
CTTACGCTGC TCGAGGTCAC CCTGGGTGCT TATGCCCAGG CTGAGGTCTG GGCGGCTTGG
GGCCTGCGGG TTGCCGAATC CATTGGGCTA AAGCATCCAT CCCTGCGCAA CACTTTGCAC
ATGGCGTGGG GCTACGCCCA GGTTTTAGGG GGACGGCTGG AGAGGCTTCC GCCGCTGGAA
ATAAAGCATC CAGACGCCCT GCTGGCGCAG GGGGACTTTT TGCTGGCCCT GGGGCAGGCC
GAGGCGGCCC TCGAGGCTTA CGCAACTGTG GACGATCAAC TGCCTCCCAT CCGGGCCCGT
CGGCTGCCCA TCCTGGCCCG CAAGGTGCGG GCGCTTTTGG AACTGGGCAG GCTGGAAGAG
GCCCTGGTGC TGGGCCTCGA GGCCAAGGTG CTGGGGGCGG AAACCCTGGA CACGTTTCGT
GACTGGGGTG AGCTAGCCTA CCTGCTGCCG TTTTCTCTGC TGAACCCTTC GGAGGCCGTG
GAGCCCCTAG CAGAGCTTCT GGGGCGTTTC CTGCGGCGAC CTAGCGCGCC CCGTGCGGCC
ATGACGGCCC TGCACCTGGC CAGGGCCTAT CTCAGCCTGG GCCTGGAAGC CAAAGCCCGC
GCTACCCTGG CTGAGGCGTC GTGGGCTCTC GAAGGTTTGA GCGCAGAGGG GCGGGCCTTT
CTGGCTGGTC AGGCGGCTTT TTTTCAAGAG GTTTTTGCCC TGCTCGAGCC AGCCCCGAAG
CTCCGGTTGC ACTTTCTGGG TGGTGAGACC GTTTGGCTCG AGGGCGCTCC GCTCCAGCTC
ACCCCACGGC ATCGGGAGAT TCTGGTGGCC CTAGTCCTCA ACCCCGCCGG TCTGAGCGCA
GAGCAGTTGG CCCTCCGGGT CTGGGGCGAG GGGAGTAGGC CCGAAGTGGC GAAAGCCGAG
GTTCGGCGAC TGCGGCAGCG GCTCACCCTG GTGGTGAGCC GTCCCTACCG GCTTTCAGGC
CGGGTCTGGG CCGATTTCGT CGAGCTTCGG GAGCGGCTCT TACGCGGCAA TCTGCAGGGT
GCACTGGCGC TTTATGGCGG GCCGCTCCTG CCTGGCTCGG ACGCCCCGGT TGTGACAGAA
GCCCGCGAGG AGATCTCGTC ACTGCTTAAG AAGACGCTGC TTTCCCAGGG CGCGATCCAG
CAAGCTTTCG AGCTGGCAAT GCAGGAGGAA GACCCAGAAT TTTGGGAAGC CCTCTTGGAC
CAACTACACC CTGACGATCC GCGGCGAGTT CTTTTGCAAA CACGTTTGAA GCGCTTTTGG
TGA
 
Protein sequence
MDLEAAWGAG QHQEGLAWCL ERLCQTPVSD PLLLRYALEF ALELGQENAL FLQFPHLTHS 
QHPEVQALMS RIAWQRGQLS QALELAQQAY QQSPCFLTAY TLATAAVLRS PHEAGRWLRE
ALRQAEAAGQ PQRAVQASGA LTLLEVTLGA YAQAEVWAAW GLRVAESIGL KHPSLRNTLH
MAWGYAQVLG GRLERLPPLE IKHPDALLAQ GDFLLALGQA EAALEAYATV DDQLPPIRAR
RLPILARKVR ALLELGRLEE ALVLGLEAKV LGAETLDTFR DWGELAYLLP FSLLNPSEAV
EPLAELLGRF LRRPSAPRAA MTALHLARAY LSLGLEAKAR ATLAEASWAL EGLSAEGRAF
LAGQAAFFQE VFALLEPAPK LRLHFLGGET VWLEGAPLQL TPRHREILVA LVLNPAGLSA
EQLALRVWGE GSRPEVAKAE VRRLRQRLTL VVSRPYRLSG RVWADFVELR ERLLRGNLQG
ALALYGGPLL PGSDAPVVTE AREEISSLLK KTLLSQGAIQ QAFELAMQEE DPEFWEALLD
QLHPDDPRRV LLQTRLKRFW