Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_5551 |
Symbol | |
ID | 9249454 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014211 |
Strand | + |
Start bp | 747552 |
End bp | 750032 |
Gene Length | 2481 bp |
Protein Length | 826 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | |
Product | pyruvate phosphate dikinase PEP/pyruvate-binding protein |
Protein accession | YP_003683436 |
Protein GI | 297564463 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0952263 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTCGTGG TGGAACTGGA TCGGATCGAC GGGGTGGGGG CCGACCTGGT CGGCGGCAAG GCCGCCGGGC TGTCCGGGGC GATCTCGGCC GGAGAACGCG TGCCCCCGGG TTTCTGCGTC ACCACCGAGG CCCACCGCTC CGGGAGGCTG CCGGAGGAGG AGGTGACCGC CGCCTACGAG GCCCTCGGCG GCGGCCGGGT GGCCGTACGG TCCAGCGCGA CCGCGGAGGA CCTGCCGGAC GCCTCCTTCG CCGGACAGCA GGACACCTAC CTCGACGTCG AGGGCGCCGA CGACCTCCTC ACGGCCGTCC GCCGGTGCTG GGACTCCCTG TGGACCGACC GCGCCGTCGC CTACCGGCGC GACCGGGGAA TCGACGACGA CGGGGTGCAC ATGGCCGTCG TCGTGCAGCG CATGGTCGAT CCCCGGGCCG CGGGGGTGCT GTTCACCGCC AACCCGGTCA CCGGCACACG GGGCGAGACC GTCCTGGACG CCGTCCCCGG CCTCGGGACC GCGGTGGTCG ACGGCACGGT CCGGCCCGAC CACTACGTCG TGGCCGCGGA CGGCGGGACC GAGGGACCGG ACGACGGGTG CCTGTCGCCG GAGGAGGTGA CGGCGCTGCA CGCCGCCGGG CAGCGGCTCC AGCGCCACTT CGGCTCACCG CAGGACGTCG AATGGGCCCT GGACCGCGAC GGGACCCCCT GGATCCTCCA GTCCCGCCCG GTCACCACCC TCTTCCCGCT GCCCGACCAC CACGACGACG GGCCCCGCGC CTACTTCGAG GTCGGCAACA TGCAGGGCAT GCTCCGCCCG TTCACCCCGA TGGGCCTGTC CGTGCTGGGA ATCGTCGCCT CCGCGTGGCT CGGCTCCCGG GGCACCGGCC CCGACGGCGG GGACGCGGTG GTGGCCGACG TGGCGGGCAG GTTCTACCTG GACCTCACCC CCTACCTGCG CAACCGCTGG ATCCGCGGGT TGTTGCCGGA CAGCATGGCC GTCTACGGCC CCCGGGCCGC GGCGGCCATC CGCTCCCTCC TGGACGACCC GCGGTTCGCC GCGCGCCCCG GCGGACGGAT CGACCCGGTC AGGGTGGTCG GGGCCGTCGC GCGGGCGCTG CCGCTCACCG GCAGGGTCCT CGGGGACGCC GTGGCCGCGC TCGTCGACCC CGACGACGCC AGGAGGCGCT TCCTGCGGTC CGGCGCGGTG CTCCGGGCGC GTGCCACCCG CCCCCCGGAG CACGCGCTCA CCTCCGCGCG ACGTCTGCGG CACGCGACGC GGCTCCAGAA CGAGGCGCTG ACGGAGGGGA TGGCCCCGAT GATGGGGCCC CTGTGCGTCG CGGTCCTCTC CGTCAAGGCG CCCGAACTGC TGCTCAGGGG GATCGCCGAA CCGGGCGAGG TGGCCGCCGT CCTCGGCGGG ATGCCGCACA ACGTCACCAC GGAGATGGAC CTGGCGCTGT GGCGACTGGC GGTCGGGGCG CGCGGGCACG GCGAGCTGTT CAGGGACACC CCGCCTGACG AACTGGCGTC CGGGTACCGG GCGGGAACGC TCCCCGACAT CGGTCTCGAC GTCTTCCTGG AGCGGTACGG GCACCGCGGA GCCGCCGAGG TCGACGTGGG CGTGCCCCGG TGGTCGGAGG ACCCCGCGCC CCTGTTCGCG GCGATCGCCA ACTACCTGCG GGTGAGCGAC CCGGAACAGG AACCCGACCG GAGGTTCGCC CGGGCCGCCG CCGAGGCCGA ACGCACACGG GACGCGCTGG TCCGCAGGGC GCTCGCCTCC CGGCCCGTCC GCGCGCGTCT GGCGTCGTTC TCCTTCGGCC GTGCGCGCGC CCTGGCCGGG ATGCGGGAGT ACCCCAAGTT CTCCTGGTTG TTCGCCATCG CCGAGACGCG TCGGCAGCTC CTCCTCGTCG GCGCCGAGAT GGCCGGGGCG GGACGGCTGG ACGCGCCCGA CGACATCATG TTCCTCCGCA TGCCGGAGGC ACGCGCCCTG GTGGAGGGCG CGGACCAGCG CGCGCTCGTC GCCGAGCGCC ACGCCGGGTA CCTGCGTGAG CGCGGACGCC GCCGGGTGCC CCCGGTCCTG CTGTCCGACG GCACCGACGT GGAGGCGGCG CTGCCCGCCC CGACCTCCGG GCGGGACGGG GAACTCCTCG GCGTGCCCGC CTCCTCGGGA ACCGCGACCG GGGTGGCGAG GGTGGTCCAC GATCCGGCGG GGGCCACGCT GGAACCGGGG GAGATCCTGG TGGCCCAGAG CACGGATCCC GGATGGACAC CGCTGTTCAT GACCGCCGGA GGGCTGGTGG TGGAGACGGG GTCCACCATC GCGCACGGGC CGACGGTCGC CAGGGAGTAC GGCATCCCCG CCGTGATCTG CGTTCCCCGG GCGACCGAGG TGATCCGGGA CGGGCAGCGG ATCACCGTCG ACGGTGCCGC GGGCACGGTC CGCGTCGAGG GCGGGGAGAG ACCGGAGGAG CCCAGACCGG TGGAGGGCTA G
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Protein sequence | MLVVELDRID GVGADLVGGK AAGLSGAISA GERVPPGFCV TTEAHRSGRL PEEEVTAAYE ALGGGRVAVR SSATAEDLPD ASFAGQQDTY LDVEGADDLL TAVRRCWDSL WTDRAVAYRR DRGIDDDGVH MAVVVQRMVD PRAAGVLFTA NPVTGTRGET VLDAVPGLGT AVVDGTVRPD HYVVAADGGT EGPDDGCLSP EEVTALHAAG QRLQRHFGSP QDVEWALDRD GTPWILQSRP VTTLFPLPDH HDDGPRAYFE VGNMQGMLRP FTPMGLSVLG IVASAWLGSR GTGPDGGDAV VADVAGRFYL DLTPYLRNRW IRGLLPDSMA VYGPRAAAAI RSLLDDPRFA ARPGGRIDPV RVVGAVARAL PLTGRVLGDA VAALVDPDDA RRRFLRSGAV LRARATRPPE HALTSARRLR HATRLQNEAL TEGMAPMMGP LCVAVLSVKA PELLLRGIAE PGEVAAVLGG MPHNVTTEMD LALWRLAVGA RGHGELFRDT PPDELASGYR AGTLPDIGLD VFLERYGHRG AAEVDVGVPR WSEDPAPLFA AIANYLRVSD PEQEPDRRFA RAAAEAERTR DALVRRALAS RPVRARLASF SFGRARALAG MREYPKFSWL FAIAETRRQL LLVGAEMAGA GRLDAPDDIM FLRMPEARAL VEGADQRALV AERHAGYLRE RGRRRVPPVL LSDGTDVEAA LPAPTSGRDG ELLGVPASSG TATGVARVVH DPAGATLEPG EILVAQSTDP GWTPLFMTAG GLVVETGSTI AHGPTVAREY GIPAVICVPR ATEVIRDGQR ITVDGAAGTV RVEGGERPEE PRPVEG
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