Gene Ndas_5484 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_5484 
Symbol 
ID9249387 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014211 
Strand+ 
Start bp678622 
End bp679806 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content73% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003683369 
Protein GI297564396 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.188368 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGATA TGTTGCCGGG CGGCGGACTC CAGCAGGACA GGTTTCCGAC GGTGCGCAAG 
GGCGGCTACG ACAAGGCGCA CGTCGACGAC TACTTCGTGC GGACGGACAA CCAGGTCAAG 
AGTCTGCGCG AGCGCCTCCA GCGGCTGGAC GACGAGCTGG AGCAGTACAA GCGCGACCTC 
GCCATCGCCC GCGAGAAGGC GCAGGTCAAG CCGGAGCACG AGCAGATCAG CGAGCGCATG 
GCCGAGATCC TGCGCATCGC CGAGGAGGAG GCCCAGGAGC GCCGCTCCAA GGTCGAGTCC 
GAGGTGAAGG AGGCCGAGAA GAAGGCCCAG GACGAGATCG CCAAGTACCG CAAGGACGCC 
GAGGAGCACG CCGAGCGGAT CCTGTCCTCC GCGCGCTCGG AGGCCCACTC GATGGTCGAC 
AGCGCCAAGA AGGAGTCCGA CCAGCTCCGG GAACAGGCCA AGCAGGAGGG CGAGCGCCGC 
CTGAACGAGG CCGAGGCGCG CGCGAAGAAG ATCCACGACA CCGCGGACCG CAGGCTCGCC 
ACCCTCACCG CCACGCACGC CGAGGCGCTG CGCCGCCTCA AGGACATGCA CTCGACCCTG 
GCCGACCTGG TCGCGGCCGA GGACAAGGCG GGCGCGCTGG AGAGCGGGCT CTCCCGCGAC 
GAGGTGGCCG CCGCGTCCGC CCCGGCCAAG CCGGCCCCGG CCAAGCCCGC CGCGGCGGCC 
AAGGCCCCCG AGCGCGCCGC GGAGCCCTCC CGGCCCCAGC CCCGCCCCGA GGCGGCCGCG 
CCCGCTCCGG CCAAGCCGGC CCCGGACGCG CCCGGGGACA AGGACGAGGC CACCACCAAG 
CTGCCTCCGC TCCAGCAGCA GCCGGACGAG GCGACCGTGC GCATCAGGCC GGTGGCCAAG 
CCGGAGCAGA CCGGCCAGGA CCCGGCGGGG AACTCCTCCC CGAAGGACCA GGCCCAGTCC 
GCTCCCCGCC CCCCGCAGGG CGCCCGCTTC ACCGGTCCCG CCCCCGAGGG CGACCAGAAG 
CCGCAGCCCG GCCCGCAGCA GCCGCAGTCC GGTCCGCAGC AGGGCCAGAA GGGCCAGGAG 
CAGGGCGGCG ATCCGGGCAT CACCGGTATC TACCGCCACC CGGAGTCCGG CCACAACCAG 
CCGCCCAAGG GCGAGGACGG CGTCCGGGTC ATCCGCAAGC CCTGA
 
Protein sequence
MSDMLPGGGL QQDRFPTVRK GGYDKAHVDD YFVRTDNQVK SLRERLQRLD DELEQYKRDL 
AIAREKAQVK PEHEQISERM AEILRIAEEE AQERRSKVES EVKEAEKKAQ DEIAKYRKDA 
EEHAERILSS ARSEAHSMVD SAKKESDQLR EQAKQEGERR LNEAEARAKK IHDTADRRLA 
TLTATHAEAL RRLKDMHSTL ADLVAAEDKA GALESGLSRD EVAAASAPAK PAPAKPAAAA 
KAPERAAEPS RPQPRPEAAA PAPAKPAPDA PGDKDEATTK LPPLQQQPDE ATVRIRPVAK 
PEQTGQDPAG NSSPKDQAQS APRPPQGARF TGPAPEGDQK PQPGPQQPQS GPQQGQKGQE 
QGGDPGITGI YRHPESGHNQ PPKGEDGVRV IRKP