Gene Ndas_5475 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_5475 
Symbol 
ID9249378 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014211 
Strand
Start bp669369 
End bp669977 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content77% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003683360 
Protein GI297564387 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCGTGC CCAGGTACGT GGACAAGGAC GGACGCCGCC GACAGGTGGC CGCCGCCCTG 
CACCGGATCG CCGCCCGCGA GGGCCTGGAG AGTGTCAGCA TCCGCACCGT GGCGGCCGAG
GCCGGACTCT CCGTCGGAGC CGTCCAGCGC GACTTCGGGA CCAAGGAGGC GCTTCTCCTC
TTCGCCATGC ACGAGGTCGT CGACGCGGTC GCCGCGCGGC TCGCCCGGGT GCGGATCGGC
CCGGGGCTGC TGTCCTTCGC CGAGGGGCTG CGGCAGGTGC TCACCGACCT GCTGCCGACC
GACGACGAGC GCCTGGCCGA GGCCCGCGTC TGGTCGGCGT TCTACGCCCG CGCGGCCGTG
GACGCCGAGT TCGCGGAGGT CCTGGCCGGG TTCGACGTCC GGGCCCGCGC CGCTCTGCGC
GCCGCCGTCG GCTGGGCGGG CGAGCAGGGG GAACTGGCCC CCGGGCAGGA CCCGGACGCC
CTGGTGGAAC TCCTGCTGGT CCTCGTGGAC GGGATCTGGC TCAGCGCCGT CCGCCAGCCC
CCGGGCTCCC CGCTGGACGC CCAGCGCGCC GCGGTGGAGG CGGCGGTCGC GGCGGTCACA
CGCGGGTAG
 
Protein sequence
MAVPRYVDKD GRRRQVAAAL HRIAAREGLE SVSIRTVAAE AGLSVGAVQR DFGTKEALLL 
FAMHEVVDAV AARLARVRIG PGLLSFAEGL RQVLTDLLPT DDERLAEARV WSAFYARAAV
DAEFAEVLAG FDVRARAALR AAVGWAGEQG ELAPGQDPDA LVELLLVLVD GIWLSAVRQP
PGSPLDAQRA AVEAAVAAVT RG