Gene Ndas_5450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_5450 
Symbol 
ID9249353 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014211 
Strand
Start bp635554 
End bp636531 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content70% 
IMG OID 
ProductRimK domain protein ATP-grasp 
Protein accessionYP_003683335 
Protein GI297564362 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.146926 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTCCT CCGCAGCACG GAAGGCGGTG CTCGTCCTCA CCCACATCGA GGACGCCACC 
GCCGACCCCG TGATCCATCA CCTGTCCGAA CGCGGCGTGC CCGTCGTGCG CATGGACCCC
GGCGACTTCC CCGCCTCCAT GACGGTGGAG GCCGCCTTCG ACGGGAACTG GGAAGGAGCG
GTGCACGACG CCTTCCGCGG CGTGGACCTG GGATCGGTAC GGGGGGTCTA CTATCGGCGC
CCCTCCCAGT TCACGTTGGC CGAGGGCATG TCCGGCCCCG ACCAGCGCTG GGCCTACCGC
GAGGCCCGCA TGGGTTTCGG TGGTGTCCTC CTGGCGCTGG ACTGCCTCTG GATCAACCAG
CCGTCACGCA TGAGCGCGGC TGAGTACAAG CCCGTCCAGC TGGCGGCGGC GGCCAGGGCC
GGGCTGAAGG TACCGCGCAC GATCATCACG AACGTGCCCG ACCACGCCGC GGATTGGGCC
GCCGGTATCC CCGGCCCCGT CGTGTACAAG CCGGTCGGCG GCGCGCTGCA CGTCGAACAG
GGCCGTACCC GGATCGTCTA CGCCAGCGCC GTCGCCGCCG TGGAGGAACT CCGCGACCCT
GCCGTGGGCC TGACCGCCCA CTGCTTCCAG GAATGGGTGG ACAAGGCGTT CGAGGTCCGT
CTGACCGTCG TGGGCCGGAC GATGTTCGCC GTGGCCATCC ACGCCCGGTC CCAGGCCGCG
CACATCGACT GGCGCAGTGA CTACGACGCC CACCGGTACG AGGTCGTCGG CATCCCCGAC
GACGTCCGCT CCGGCCTGGA GCGCTACATG CGCGCCTTCG GACTCGTCTG CGGCGCCGCC
GACTTCGTGG TCTCACCCGA CGGCGGGTGG ACCCTGCTGG AGGTCAACCC CAACGGCGAG
TGGGGATGGC TCGCGGACCG CTGTGGTCTG CCCATCGGGC AGAGCATCGC CGAACTACTG
GAGAAGGGAC AGATGTGA
 
Protein sequence
MASSAARKAV LVLTHIEDAT ADPVIHHLSE RGVPVVRMDP GDFPASMTVE AAFDGNWEGA 
VHDAFRGVDL GSVRGVYYRR PSQFTLAEGM SGPDQRWAYR EARMGFGGVL LALDCLWINQ
PSRMSAAEYK PVQLAAAARA GLKVPRTIIT NVPDHAADWA AGIPGPVVYK PVGGALHVEQ
GRTRIVYASA VAAVEELRDP AVGLTAHCFQ EWVDKAFEVR LTVVGRTMFA VAIHARSQAA
HIDWRSDYDA HRYEVVGIPD DVRSGLERYM RAFGLVCGAA DFVVSPDGGW TLLEVNPNGE
WGWLADRCGL PIGQSIAELL EKGQM