Gene Ndas_5385 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_5385 
Symbol 
ID9249288 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014211 
Strand+ 
Start bp564879 
End bp565613 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content73% 
IMG OID 
ProductSpermine synthase 
Protein accessionYP_003683271 
Protein GI297564298 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGGGTA TGGACCAGCC GACGACGTAC ACCGCCCCGG TTTCCCGTGA GCCCGAGGAG 
GAGACGGCCA CCCTGGCGAG GGTGACCGGG GAGACCGGCG GAGACCTCGT GCTGCGCCGC 
GTGGGCGCGC ACTACGAGAT CTACTCCAAC GGCGTCTTCC TCATGGACAC CCGCGACGGC 
ACCTCCGAGC GGGAGATGGT GCGCGCCAGC CTCGCCGCCC TCCCGGCGGG CCGCTCGCGC 
TCCCGGGTGC TCATCGGCGG CCTGGGCGTG GGTTTCTCCG CCCGCGAGGC CCTGGAGCAC 
CCCCGGGTGG CGGTGGTGGA CGTGGTGGAA CTCGAATCCC ACGTGATCGC CTGGCACGAC 
GGGGAACTGG GCGAGGCCGC CGAGTACGTG CACCGGGACC CGCGCTGCCG GGTGGTCAAC 
GCCGACATCG TGGCCTGGCT GGAGGAGGCG TCCTCGGCCG CGGCCCCCGT CCGCTACGAC 
GCGATCTGCC TGGACACCGA CAACGGGCCC GACTGGACGG TGGTGGAGAA CAACAACCGC 
CTCTACGAGG CGGCCGGGCT GGACCGGCTC ACCCGCCTGC TCGCCCCCGG CGGGGTCCTG 
GCCTTCTGGA GCGCCAACGC GGTGCCCGCC TTCGAGGAGT CGCTGCGGGG CAGGTTCGCC 
TCGGTGGAGG TCATCGAGGT GCCGGTCGCC CGCGGCGTGC CCGACACCGT CTATCTGGCG 
CGCGAGCCGC GCTGA
 
Protein sequence
MWGMDQPTTY TAPVSREPEE ETATLARVTG ETGGDLVLRR VGAHYEIYSN GVFLMDTRDG 
TSEREMVRAS LAALPAGRSR SRVLIGGLGV GFSAREALEH PRVAVVDVVE LESHVIAWHD 
GELGEAAEYV HRDPRCRVVN ADIVAWLEEA SSAAAPVRYD AICLDTDNGP DWTVVENNNR 
LYEAAGLDRL TRLLAPGGVL AFWSANAVPA FEESLRGRFA SVEVIEVPVA RGVPDTVYLA 
REPR