Gene Ndas_5374 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_5374 
Symbol 
ID9249277 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014211 
Strand
Start bp555692 
End bp556348 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content71% 
IMG OID 
Producttwo component transcriptional regulator, winged helix family 
Protein accessionYP_003683260 
Protein GI297564287 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGGTCT TGGTCGTGGA CCACGGAGAG GACCCCGCAC AGCCGACCGC CTCATGGCTG 
CGGGAGGCCG GTTTCGCCGT GGACACCGCT CCCGACGGGG AGACGGCGCT GTACAAGCTC
GCCGTCAACG AGTACGGGGT CATGCTGCTC GAACGGGCTC TGCCGGGGCT GAGCGGGAAC
GAGGTGTGCC GCGTGGCCAC CGCCCTGCAC GGTCAGGTGC GGGTGCTCAT GGTGAGTTCT
CCCACCAGCC CGAAGGAGCG GCTCGCCGGT TTCGAGCTGG GCGCGGACGA CTACCTCATC
AGGCCCCTCG ACCGCGAGGA GATGATCGCC CGGGTCCGCG CCCTGGCCAG GAGGCCCGGC
CTGGCCGAAC CGCCGGTTCT GGAGCGCTCG GGCCTGCGGC TCAACTCCAC CCGCTACGAG
GCCTTCCGCG ACGGCAGGCC GCTGCACCTG TCGCCCAAGC AGTTCGGGGT GCTGGAGGAG
CTGCTGCGCG CCGACGGCGC CCCGGTGTCG GCGGAGGCGC TGCTGGAGAG GGTGTGGGAC
GAGAACATCG ACCCGTTCAC CACGATCGTG CGCGTGACCA TCCGCTCCCT GCGGCGCAAG
CTGGGCACCC CGAACCCCAT CCAGACCGTG CCCCGCGTGG GTTACCGGCT GCCGTGA
 
Protein sequence
MRVLVVDHGE DPAQPTASWL REAGFAVDTA PDGETALYKL AVNEYGVMLL ERALPGLSGN 
EVCRVATALH GQVRVLMVSS PTSPKERLAG FELGADDYLI RPLDREEMIA RVRALARRPG
LAEPPVLERS GLRLNSTRYE AFRDGRPLHL SPKQFGVLEE LLRADGAPVS AEALLERVWD
ENIDPFTTIV RVTIRSLRRK LGTPNPIQTV PRVGYRLP