Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_5374 |
Symbol | |
ID | 9249277 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014211 |
Strand | - |
Start bp | 555692 |
End bp | 556348 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | two component transcriptional regulator, winged helix family |
Protein accession | YP_003683260 |
Protein GI | 297564287 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGGTCT TGGTCGTGGA CCACGGAGAG GACCCCGCAC AGCCGACCGC CTCATGGCTG CGGGAGGCCG GTTTCGCCGT GGACACCGCT CCCGACGGGG AGACGGCGCT GTACAAGCTC GCCGTCAACG AGTACGGGGT CATGCTGCTC GAACGGGCTC TGCCGGGGCT GAGCGGGAAC GAGGTGTGCC GCGTGGCCAC CGCCCTGCAC GGTCAGGTGC GGGTGCTCAT GGTGAGTTCT CCCACCAGCC CGAAGGAGCG GCTCGCCGGT TTCGAGCTGG GCGCGGACGA CTACCTCATC AGGCCCCTCG ACCGCGAGGA GATGATCGCC CGGGTCCGCG CCCTGGCCAG GAGGCCCGGC CTGGCCGAAC CGCCGGTTCT GGAGCGCTCG GGCCTGCGGC TCAACTCCAC CCGCTACGAG GCCTTCCGCG ACGGCAGGCC GCTGCACCTG TCGCCCAAGC AGTTCGGGGT GCTGGAGGAG CTGCTGCGCG CCGACGGCGC CCCGGTGTCG GCGGAGGCGC TGCTGGAGAG GGTGTGGGAC GAGAACATCG ACCCGTTCAC CACGATCGTG CGCGTGACCA TCCGCTCCCT GCGGCGCAAG CTGGGCACCC CGAACCCCAT CCAGACCGTG CCCCGCGTGG GTTACCGGCT GCCGTGA
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Protein sequence | MRVLVVDHGE DPAQPTASWL REAGFAVDTA PDGETALYKL AVNEYGVMLL ERALPGLSGN EVCRVATALH GQVRVLMVSS PTSPKERLAG FELGADDYLI RPLDREEMIA RVRALARRPG LAEPPVLERS GLRLNSTRYE AFRDGRPLHL SPKQFGVLEE LLRADGAPVS AEALLERVWD ENIDPFTTIV RVTIRSLRRK LGTPNPIQTV PRVGYRLP
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