Gene Ndas_5301 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_5301 
Symbol 
ID9249200 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014211 
Strand
Start bp465779 
End bp466636 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content75% 
IMG OID 
ProductProtein of unknown function DUF2236 
Protein accessionYP_003683187 
Protein GI297564214 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0527126 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCAGAC CGTCCGACCG ATCACCTCTG CGACGGATCA GCGCGGAGGC CTGCGTCCTC 
GGCGGCGCGG GGTACGCCGT CCTGCTCCAG ATCGCCCACC CCGGCGTCGC CCGCGGGGTG
CACGACCACA GCGACTTCTC CTCCCGGCCG TTCGACCGGC TGCTCGGCAC CCTCTACTTC
GTGTACGGCA CGGTCTACGG CACCGAGGAG GAGAGGAGGC GCCTGCACGC CATCGTGCGG
GCGCTGCACC GCAAGGTGAA CGGCCCCGGG TACCGGGCCC TGGACGACGA CCTCCTGCTG
TGGGTGGCCG CCACCCTGTT CCAGACCGCC TCGCGACTGC ACGCGATGGT GTTCGGCGAA
CTCGGCGAGG AGGACCGCGC CCTGCACCTG TGCGAGGCTT CGGCGTTCGC CACCGCCCTG
GGCCTGCCCG AGGAGAAGTG GCCGGCGTCC CCCGAGGAGT TCGCCGCCTA CTGGGACGGC
GCCCTGGCCC TGCTGGACGT GGGCGAGGAG GCCCGCGCCA TCACCGGGCA GCTGTTCCAC
CCGGCGAGCG CGCCCCTGCG CCCGCTGATG CGGGTCCAGC TCCTGCTCAC CGGCGGGCTG
CTTCCGCCCG ACCTGCGCGA GCGGTTCGCG ATCCCGTGGT CGCCGGCGCG CCAGCGCCGC
TTCGACCGGA TCGTGCGGAC GACCCGCGCG GTGTACCCCT ACGTTCCCCG GCCGGTGCGC
GTCCTGCCCG CCACGCTGTG CCTGTGGACC ATGCGGCGCG GAACCCTGGG GCCGCGCTGG
CTGGGGCCGC CGCGGCGCCG TTCGGAACCC GGTGCGGCGC CGCGCCGCGG GGCGGGGGGA
ACCGTCGGCC GGGACTGA
 
Protein sequence
MGRPSDRSPL RRISAEACVL GGAGYAVLLQ IAHPGVARGV HDHSDFSSRP FDRLLGTLYF 
VYGTVYGTEE ERRRLHAIVR ALHRKVNGPG YRALDDDLLL WVAATLFQTA SRLHAMVFGE
LGEEDRALHL CEASAFATAL GLPEEKWPAS PEEFAAYWDG ALALLDVGEE ARAITGQLFH
PASAPLRPLM RVQLLLTGGL LPPDLRERFA IPWSPARQRR FDRIVRTTRA VYPYVPRPVR
VLPATLCLWT MRRGTLGPRW LGPPRRRSEP GAAPRRGAGG TVGRD