| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_5300 |
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| Symbol | |
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| ID | 9249199 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014211 |
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| Strand | + |
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| Start bp | 462716 |
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| End bp | 465769 |
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| Gene Length | 3054 bp |
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| Protein Length | 1017 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | |
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| Product | transcriptional regulator, SARP family |
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| Protein accession | YP_003683186 |
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| Protein GI | 297564213 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.706654 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGTAT TCCCTATTTC CGGCCAATGG CCCTTGCTAG GGTTGCTGAT TGTGGAATTC
GGCGTGCTTG GCCCCATTAC CGTCTGGTCC GACGGCCGAC CTGTTCCGGT CGGCGGTCCG
CGCCAGCGCT GTGTGCTGGG CGCGCTGCTG GTGCACCTGG GGCGCGAAGT CACCATCGAC
CAACTCATCG GTTACCTCTG GAGCGACGAT CCGCCCCGTA CCGCCCGGTC GGTGATCCAG
GTCCAGATAT CCCACCTGCG CCGCAGCCTC CCCGGTACCA TCGCCACCAC CCCCGGCGGG
TACACCCTCG ACGTCGACGC TGACTCCGTC GACCTGCACC GCTTCCGCAG GCTCCGGGAC
CGGGCCGCCG CGGCCGAGCC CAAGACCGCG GTCGACATGC TGGAACAGGC GCTGGAGTGC
TGGCGCGGAG TCCCCTTCTC CGGTGTCGGC TCCGAGTACC TGGACTACAC CGTCGTCGCC
CCCCTCCGGG AGGAGCGCTG GTCCTGCGTC GTGGCCTGGG CCACCCACGC GCTGGAACTG
GGCAGGCACG CCGACGTGGT CTCCCGGCTG ACGTCCCTGG TCAGCGAGGA GCCCTTCAGG
GAGCGGCTGC ACCACCTGCT CATCACGGCC CTGTGGCGCG ACAACGAACG GGCCAGGGCG
CTCTCCGTCT ACGAGGAGTT CCGGGCCAGG CTGGCCGACG AGCTGGGTGT CGACCCCGGT
CCGGAACTGG TCGCCCTGCA CACCCGGATC CTCCAGGAGG ACTTCTCGGA GGAGGGGCCG
CAGGACCTGT CGTCCGGGGA GCCGGGAACG CGTTTCGTGG TCCGCAACGA CCTCCCGCGG
GACCTGCCGG ACTTCACCGG ACGCCAGGAG TCCCTGCGGC GGTTGGACGA GGTGGCCCGT
ACCGGAGACG ACCGCGCCCA GGTCTGCGTC ATCACGGGCA GCGGCGGCGA GGGCAAGACG
ACCACAGCGG TCCGCTTCGG CTATGAGGCG GCCGGGCGCT ACCCCGACGG ACAGCTGTTC
ATCGACCTGT ACGGGTACAC GACCGACAGG GAGCCTCTCG ACGCCATGTC CGCGCTGGGC
GCCCTGCTGC GCGCGGTCGG CGTCGAGCCC GAGGCCGTGC CCGAGTCCCT CGAAGAGCGC
GCGGCGCTGT GGCGGGCCAC CCTCATGGGG CGCAGGGTCC TGGTCATCCT CGACAACGCG
TTCAGCTATG CCCAGGTCAG CCCGCTCCTC TCCTCCTCGC CGGGGTCGAT GACCCTCATC
ACGACCCGCA ACGAACTCTC CGGGCTCAGC GGCGCCCGCT TCCTCTCCCT GGGGGTGTTC
GACGAGAGCT CCTCCCTGGA GCTGCTCGGA CGCGTCCTGG GAGAGGACCG CGTACAGCGC
GAACCGGACC AGGCCCGGGA GATCATCCGG ATCTGCGGTG GCCTCCCCCT CGCCCTGCGC
GTGGTGGCGG GACGGATGCT CAGCCGTCCC AGGTGGTCGT TCGCGCACGT CGCCCGCCGA
CTCGGTGAGC AGAACCGGAA GTTCCGCGAA CTCCAGGTCG AGGGGCAGAG CGTCGAGGCC
GCCATCGACC TGTCCTTCCA GAGCCTCAAC CGGGACCAGA GCAGGACCTT CCTCCTGCTG
GGTCTGATGA TCGGCAGCAC GATCGACCTC GGCGGCGCGG CCGCCCTCCT GGACATGACG
GTGGAGGACG CGGACGACAT ACTCCAGGAG CTGGTCGGGG TGTGCCTGCT GGAGGAGCCC
CAGGGGGACG TGTACCGCCT GCACGACCTC ATCGGGGCCT TCTCCCGGGA TCGTGCGGCC
ATGCTGCTGG ACGCCGGGGA GATCGAGGCC GCGAAGCTCC GTCTGGCGGA GCAGTACATG
GCCACGGCAC AGCACGCCGC CGACCTCCTG GGGCCGCGCG CGCACGACGA CGAGATCGAC
GTGAGCCGGG GTTACCGCAC CGAACTGTCG GGGAGGGAGG ACGCCGAGAA CTGGTTCACC
CTGCACCAGG AGAACCTCGC GGAGACGATC GAGTACTTCG CCTCGCACGG CAACGGCGAG
TACGCCTGGC GTATGGCGGA CGCGGTGTGG CGTTTCTACG CCCTCCACGG CCAGATGGGC
CTGCTGATCA GTTCCCACCA GCGGGCACTC CAGATCAGCG ACAAGCAGGG GAACCGGCGC
GGGCGCGCGG TGACCCTCAT CGGGCTGGGC ATCGCCCACT GCCTCTCGGG GCGCTTCGAC
GAGTCGCTCG CCTTCCTCAC CGAGGCCCGG GAACTGCTGA CCGCGATCCA CGACAGCAGG
GGGATCATCC GGGCCCTGGC CAACCTGGGG ATGGTCTACG AGCGCGTCGG CCGTCTCGCT
GACGCGGCGG AGTCCATCCA GGGTGTGCTG GACTACGCGG TCCAGCTGGG CGACACCCGC
CTGGAGGCGT TGCAGTGGGG CAACCTCGCC GTCCTCAAAC AGACGCTCGG CGCGTACACG
GAGGCTCTCC ACTGTGCCCA GCAGTCCATG GAGAAGGCCG TGGGCGAGGG CCAGAAGGTG
ACCCGGTCCC ACGCCAAACG GGTCATGGGG GAGGCCCGCA CCGGGCTCGG AGAGCTGGAC
GCGGCCTTCG CCGACCTGAA CGAGGCCCTG GAGCTGTCAC ACGAGCTGCG CCTGGTGGGC
AACCAGGTCT ACATCCACAA CTCCCTGGGG CTGGCCCACC GGGCCGCGGA GCAGTGGGAG
CGGGCGATCG AGTCCCACAC CACGGCACTG GACCTGGCCG AGCAGCACGG GCGCCGCAGT
GGTGACGCCG AGATCCGCGT CGACCTGGGG ATGACCTACG CGGCCGCCGG ACGCCACCGC
GAGGCGCTGT CCGAGCTGGA GGGGGCCCAC GCCATCGCGG TGGAGCGCGG CGAGCGCCAC
ATGGTCGCCC GCGCCGCGCT CGCCCTCGGA CGCCTGCCCG CACCGGTCAT GGCCGCGGAC
CGGGCCCGGG GGTTCCTCGG CGAGGCCGAG GAGATCTTCA CCGAGTTGGG GCTGGCCGAG
GCGGAACAGG CCAGGAAGGC CCTGAAGGAC CACCCGCCCG CGTCCCTCGG CTGA
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| Protein sequence | MSVFPISGQW PLLGLLIVEF GVLGPITVWS DGRPVPVGGP RQRCVLGALL VHLGREVTID
QLIGYLWSDD PPRTARSVIQ VQISHLRRSL PGTIATTPGG YTLDVDADSV DLHRFRRLRD
RAAAAEPKTA VDMLEQALEC WRGVPFSGVG SEYLDYTVVA PLREERWSCV VAWATHALEL
GRHADVVSRL TSLVSEEPFR ERLHHLLITA LWRDNERARA LSVYEEFRAR LADELGVDPG
PELVALHTRI LQEDFSEEGP QDLSSGEPGT RFVVRNDLPR DLPDFTGRQE SLRRLDEVAR
TGDDRAQVCV ITGSGGEGKT TTAVRFGYEA AGRYPDGQLF IDLYGYTTDR EPLDAMSALG
ALLRAVGVEP EAVPESLEER AALWRATLMG RRVLVILDNA FSYAQVSPLL SSSPGSMTLI
TTRNELSGLS GARFLSLGVF DESSSLELLG RVLGEDRVQR EPDQAREIIR ICGGLPLALR
VVAGRMLSRP RWSFAHVARR LGEQNRKFRE LQVEGQSVEA AIDLSFQSLN RDQSRTFLLL
GLMIGSTIDL GGAAALLDMT VEDADDILQE LVGVCLLEEP QGDVYRLHDL IGAFSRDRAA
MLLDAGEIEA AKLRLAEQYM ATAQHAADLL GPRAHDDEID VSRGYRTELS GREDAENWFT
LHQENLAETI EYFASHGNGE YAWRMADAVW RFYALHGQMG LLISSHQRAL QISDKQGNRR
GRAVTLIGLG IAHCLSGRFD ESLAFLTEAR ELLTAIHDSR GIIRALANLG MVYERVGRLA
DAAESIQGVL DYAVQLGDTR LEALQWGNLA VLKQTLGAYT EALHCAQQSM EKAVGEGQKV
TRSHAKRVMG EARTGLGELD AAFADLNEAL ELSHELRLVG NQVYIHNSLG LAHRAAEQWE
RAIESHTTAL DLAEQHGRRS GDAEIRVDLG MTYAAAGRHR EALSELEGAH AIAVERGERH
MVARAALALG RLPAPVMAAD RARGFLGEAE EIFTELGLAE AEQARKALKD HPPASLG
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