| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_5273 |
|---|
| Symbol | |
|---|
| ID | 9249171 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014211 |
|---|
| Strand | - |
|---|
| Start bp | 437877 |
|---|
| End bp | 438422 |
|---|
| Gene Length | 546 bp |
|---|
| Protein Length | 181 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | Protein of unknown function DUF2587 |
|---|
| Protein accession | YP_003683159 |
|---|
| Protein GI | 297564186 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.281014 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAGCG CAGAGAACCC GGACGAGCAG GCTCGGATCC TGGTCATGGG AACCGACCGC
GACGGGGACG GCGAGGAGGG CGCGGAGGAG CCGCGCACCC TCGCCGACAT GGTGGAGCAG
CCCGCCAAGG TGATGCGGAT CGGCAGCATG ATCCGGCAGC TCCTGGAGGA GGTCAAGGCC
GCTCCGCTGG ACGAGGCGAG CCGGGCCAGG CTCAAGGAGA TCCACACCTC GTCCATCAAG
GAGCTGGAGG ACGGTCTGGC CCCCGAGCTG ATCGAGGAGC TGGAGCGGCT GACCCTGCCG
TTCGCTGAGG GCGCGGCCCC CAGCGACGCC GAGCTGCGCA TCGCGCAGGC GCAGCTGGTG
GGCTGGCTGG AGGGGCTGTT CCACGGCATC CAGACCACCC TGTTCGCCCA GCAGATGGCG
GCCCGCGCCC AGCTGGAGAA CATGCGCAAG GCCCTGCCGC CCGGCATCGC GGGTCTTCAG
GCCCAGGGGC CCGGCGCCCC CGGCGGCCTG GACGAGGAGC GGCACGGCTC CGGTCCGTAC
CTGTAG
|
|---|
| Protein sequence | MSSAENPDEQ ARILVMGTDR DGDGEEGAEE PRTLADMVEQ PAKVMRIGSM IRQLLEEVKA
APLDEASRAR LKEIHTSSIK ELEDGLAPEL IEELERLTLP FAEGAAPSDA ELRIAQAQLV
GWLEGLFHGI QTTLFAQQMA ARAQLENMRK ALPPGIAGLQ AQGPGAPGGL DEERHGSGPY
L
|
|---|
| |