Gene Ndas_5254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_5254 
Symbol 
ID9249152 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014211 
Strand- 
Start bp416268 
End bp417290 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content74% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003683140 
Protein GI297564167 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.920731 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCGC ACACCACGGC GACCACGGCA GGCGGCGGAG AACCCGTCCG GAGCGGCCTG 
GGGCTGGTCC ACGAACAGGG GCGCTCGCTG CGCCTGACCC ACGACGGCGG CGAACTCGTC 
CGCTACGTGT ACCGGCCCTG GGACGCGCAG CTGGAGTCGC CGCGCCCCTA CCTCCACCCG 
GTCCGCACCC TGGGCGGGGA CACCGTCAGC CTGTACCGGC CGCACGACCA CGTGTGGCAC 
AAGGGGATCG CGTGGTCCCT GCCCAACGTC GGGACGGCCA ACTTCTGGGG CGGCCCGACC 
TACCTCCGGG ACGCGGGGTA CCGGCAGCTC GCCAACGACG GCTCGACAGA GCACCGCTCC 
TTCGATCGGA TCGAGGCCTC ACCGGAACGG GTCTCGATAG GCGAACGGCT GGAGTGGGTG 
ACCGAGCAGG GCGAGACCTG GTTCTCCGAG CGGCGGGGGC TGCGGTTCAC CGCGGCCCCC 
GACCGGGGGG CCTGGACGAT GGTGTTCACG ACCTCCTTCA CCAACCTGAC GGAGGAGGAG 
GTCCCCTTCG GCAGCCCCAC CACGGAGGGG CGGCCCAACG CCGGGTACGG GGGTCTGTTC 
TGGCGCGGCC CCCGCTCCTT CAGCGGGGGC CGCGCCTACG CGGAGGGGCG GGAGGGCGAC 
GACGACCTCA TGGGTGCGCG GTCGCCCTGG TTGGCCTTCA CCGGCCGCCA CGACGGCACG 
GACGGGGCTT CGACCCTGGT CTTCGCCGAC GCCCCCGACA ACCCCGGCCA CCCCGTGAAG 
TGGTTCGTGC GCAGCGGGAT CTTCGCCTGC GTGTGCCCGG CGCCCTTCTT CGACGAGGTG 
GTGACCGTCC CCGCGGGGGG CTCCCTCGCC TACCGGTACG CGGTCGTCGT CGCCGACGGG 
GAGCGGGGCG CGGAGGGGGC CAGGGCCCTG GCCGACCTCG GCCTGGGCGA ACTGGAGGAC 
GCGGCCGCCG AGGCGGGCTC CGGCGGCGGC ACGGTCGGGG GCTCCGGCGG GGAGGAGCGG 
TGA
 
Protein sequence
MSAHTTATTA GGGEPVRSGL GLVHEQGRSL RLTHDGGELV RYVYRPWDAQ LESPRPYLHP 
VRTLGGDTVS LYRPHDHVWH KGIAWSLPNV GTANFWGGPT YLRDAGYRQL ANDGSTEHRS 
FDRIEASPER VSIGERLEWV TEQGETWFSE RRGLRFTAAP DRGAWTMVFT TSFTNLTEEE 
VPFGSPTTEG RPNAGYGGLF WRGPRSFSGG RAYAEGREGD DDLMGARSPW LAFTGRHDGT 
DGASTLVFAD APDNPGHPVK WFVRSGIFAC VCPAPFFDEV VTVPAGGSLA YRYAVVVADG 
ERGAEGARAL ADLGLGELED AAAEAGSGGG TVGGSGGEER