| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_5215 |
|---|
| Symbol | |
|---|
| ID | 9249108 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014211 |
|---|
| Strand | + |
|---|
| Start bp | 366573 |
|---|
| End bp | 367493 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | ectoine/hydroxyectoine ABC transporter solute-binding protein |
|---|
| Protein accession | YP_003683101 |
|---|
| Protein GI | 297564128 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.30873 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAGAAGC CGGTACCCGC AGTACGCAGA GGAACCTGGG GCCGCCGTGA CGCGCTCCGC
CTGGGAGGAG TGGGGCTGGC CACCCTCGGA CTGGCCGCCT GCACCCGCGT CGACGGCGGA
GGAGGAGAGG GGGAGGAGGG CGCCTCGACC CTGGACCGGC TGCGCGAACA GGGCTTCGTG
GCCGTCGGCC TCGCCAACGA GATCCCCTTC GGCTTCGTCG ACGACTCCGG CAACCCGGCC
GGGCAGTCCC CAGCCGTGGC GAAGGCGGTC TTCGAGGAGC TGGGCGTCCC CGAGATCCAG
GCCTCCTCGG TGAACTGGGA CGGGCTGATC CCCGGCCTGA ACGCGAACCG CTTCGACGTC
ATCGCCGCGG GCATGTTCAT CACCCCCGAG CGCTGCGGAC AGGTCGCCTT CAGCGAGCCC
ACCGCGACCT CCCCCGAGGC CTTCATGGTC GCGGAGGGCA ACCCGGAGAA CATCCAGCAC
TTCACGGACT TCGTGGACAA CCCCGACCTC ATGCTCGCGG TCCTCAACGG TTCGGTCGAG
CAGACCTACG CCGAGTACTT CGAGGTCCCC GAGAACCAGA TGGAGCTCAT CCCCAACCAG
ACCGCGGGCT ACGAGCTGCT GGAGGCCGGG CGCGTGGACG CGATGTCCAT GCTCAGCGTG
TCCCACACCT ACCTCCTCCA GGACCGGGGC GGCCCCTTCG AGGTCACCGA ACCCTTCTTC
CCCGAGATCG ACGGCCGGGA GGAGAAGGGC TGGGGCGGGC TGTGCCTGCG CCAGCAGGAC
ACCCAGCTCC TGGAGGAGGT CAACCGGGTG ATCGCCGAGT TCAAGGAGAG CGGACGCCTC
CTGGAACTGG GCGAGGAGTG GGGCTTCACC GAGGCCGACC TGCCCGACGA CACGACCACC
GCCGAACTCT GCGAGGGATG A
|
|---|
| Protein sequence | MKKPVPAVRR GTWGRRDALR LGGVGLATLG LAACTRVDGG GGEGEEGAST LDRLREQGFV
AVGLANEIPF GFVDDSGNPA GQSPAVAKAV FEELGVPEIQ ASSVNWDGLI PGLNANRFDV
IAAGMFITPE RCGQVAFSEP TATSPEAFMV AEGNPENIQH FTDFVDNPDL MLAVLNGSVE
QTYAEYFEVP ENQMELIPNQ TAGYELLEAG RVDAMSMLSV SHTYLLQDRG GPFEVTEPFF
PEIDGREEKG WGGLCLRQQD TQLLEEVNRV IAEFKESGRL LELGEEWGFT EADLPDDTTT
AELCEG
|
|---|
| |