Gene Ndas_5205 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_5205 
Symbol 
ID9249098 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014211 
Strand
Start bp355789 
End bp356550 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content74% 
IMG OID 
ProductANTAR domain protein with unknown sensor 
Protein accessionYP_003683091 
Protein GI297564118 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.536596 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.563697 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTGGATCG AACGCCTGGC CCGGGATATC GGCGCGCTGG GACAGGCGGA TGGCACCACC 
CTGGAACGGG CCCTGGACCA GATGAGCAGG GCCGCGGCCC TGGGCGTCCC CGGCTGCTCG
GCCGCGCTCG TCGTGGTCTG GCGCGAGGTC GAGGGGGCCG ACGGCTCCGT GCGGCACGTG
GTCACCGACT ACGGAGCCTC CCACGCGGAC CTGTCCGCGG CCTTCGAGCA CCAGTACACC
ACCGACCAGG GGCCCACCGT CGAGGCCGTC CGCGAGATGG GCCGGGTGCG GGTGGGCGAC
ATCCTGCGCG AACCCCACCG CTGGCCCCGC TACACCAGCA TGGCGGTCCA GTGCGGGGAC
CGCTCCTCCA TCACCCTGCC CAGTCTGCTG CCCGGCGAGG GCGACGACCG GGTGATCACC
TTCGGCGTGC ACTCCGGCCG GGCCGACGCC TTCGACGAGG AGGTCGTCGC CCCGCTGACC
GCCCTGCTCG CCGAGCACGC CGCCGTGTCG CTGTACAGTG CCGGACGCCA GGCCGACGTG
GCCAGGGAGA CCGCCCACAT GCGCCGGGCC ATGTCCGCGC GTACGGTGAT CGACCAGGCC
AAGGGCATCA TCATGCACGC CCGCGGCTGC GACGCCGACA CCGCCTTCGC CGCGCTGCGC
GAGGTCGCCC AGCGCAACCG CAAACGGGTG GTGGACGTGG CCCGCGACCT CGTGGCGGAG
AACACCGGTC CCCAGCCCCG GATGCGCCCC GACCGAAGGT GA
 
Protein sequence
MWIERLARDI GALGQADGTT LERALDQMSR AAALGVPGCS AALVVVWREV EGADGSVRHV 
VTDYGASHAD LSAAFEHQYT TDQGPTVEAV REMGRVRVGD ILREPHRWPR YTSMAVQCGD
RSSITLPSLL PGEGDDRVIT FGVHSGRADA FDEEVVAPLT ALLAEHAAVS LYSAGRQADV
ARETAHMRRA MSARTVIDQA KGIIMHARGC DADTAFAALR EVAQRNRKRV VDVARDLVAE
NTGPQPRMRP DRR