Gene Ndas_5195 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_5195 
Symbol 
ID9249088 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014211 
Strand+ 
Start bp338580 
End bp339527 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content73% 
IMG OID 
ProductCitrate (pro-3S)-lyase 
Protein accessionYP_003683081 
Protein GI297564108 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.152568 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGAAC TCAGGTCGCG GCGGTCGGTA CTCGCGGTGC CGGGGTCCAA CCCCCGGTTC 
GTGGACAAGG CGCGGGAATT GGACGCGGAC GCCTTCTTCC TCGACCTGGA GGACGCGGTC 
GCGCCCCTGG AGAAGGACTC CGCCCGCCAC GCCGTCGTCC GGGCGCTCAA CGACGGCGGA 
TGGGGCGGCA AGGTGCGGTC CGTCCGCGTG AACGACGTCA CCACCGGGTG GGCCTACCGC 
GACGTCGTCA CCGTCGTCGA GGGAGCCGGG GCCGAACTCG ACGCCCTGGT CCTGCCCAAG 
GTCACCTCGG CCCGCGACGT CCAGTGGCTC GACACCCTCC TCACCCAGAT CGAGCGCGCC 
GTCGGGCTGG AGGTCGGCCG GATCGGCATC GAGGCGCAGA TCGAGGACGC CCGCGGCCTG 
GTGGCCGTGG ACGGGATCGC CGCGGCCTCG CCCCGCCTGG AGAGCCTCGT CTACGGGCCC 
GCCGACTTCA TGGCCTCCAT CAACATGAAG AGCCTGGTCG TCGGCGAGCA GCCGCCCGGC 
TACGACACCG GCGACGCCTA CCACTACGTG CTCATGCGCA TCCTCACGGC CGCCCGCGCC 
CACGGGCTCC AGGCCATCGA CGGCCCCTAC CTCCAGATCC GGGACGTGGA CGCGTTCCGC 
CGCTCCGCCG GGCGCACGGC CGCCCTCGGC TTCGACGGCA AGTGGGTCCT GCACCCGCTC 
CAGGTGGAGG CCGCCAACGA GGTGTTCGCG CCCTCCCAGG AGGACTACGA CCACGCCGAG 
CTGATCCTGG ACGCCTACGC CCACGCCACC ACCGTGGACC GGCGCGGCGC CGTCATGCTC 
GGCGAGGAGA TGCTCGACGA GGCCTCCCGC AAGATGGCGC TCGTGGTCGC GGGCAAGGGG 
CGCGCGGCCG GGATGGCCCG GACCCGCGCG TTCGACCCCG GGGCCTGA
 
Protein sequence
MGELRSRRSV LAVPGSNPRF VDKARELDAD AFFLDLEDAV APLEKDSARH AVVRALNDGG 
WGGKVRSVRV NDVTTGWAYR DVVTVVEGAG AELDALVLPK VTSARDVQWL DTLLTQIERA 
VGLEVGRIGI EAQIEDARGL VAVDGIAAAS PRLESLVYGP ADFMASINMK SLVVGEQPPG 
YDTGDAYHYV LMRILTAARA HGLQAIDGPY LQIRDVDAFR RSAGRTAALG FDGKWVLHPL 
QVEAANEVFA PSQEDYDHAE LILDAYAHAT TVDRRGAVML GEEMLDEASR KMALVVAGKG 
RAAGMARTRA FDPGA