Gene Ndas_4920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_4920 
Symbol 
ID9248807 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014211 
Strand+ 
Start bp53768 
End bp54517 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content75% 
IMG OID 
ProductABC-2 type transporter 
Protein accessionYP_003682809 
Protein GI297563836 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.13049 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCACCC TGCTGCGCGT CACCGCGACC GAGGCCCGGC TGCTGACGCG CGAGCCCGTG 
GCGGTCAGCG TCGGCATCCT GCTGCCCACC GCGCTCCTGC TCGGGCTCGG CGCCCTGCCG 
ACGCTGCGGG AGCCCTCCCC GGAGTTCGGC GGCCTGCGCT TCGTCGACAC CTGGGCTCCC 
ATGGCCCTGA TCCTCGGCAT GGGGATCCTG TGCGTCCAGC ACCTGCCGAC CACCCTGGCC 
GCCTACCGGG AGCGGGGCGT CCTGCGCCGG ATGTCGACCA CGCCGATGCA CCCCGGAACG 
CTCCTGAGCG CGCAGATCAT CGTGGTCTCC GCCGCGGCGG CCGTCTCCGC CGCGCTCCTG 
GTGCTGTCCT CCTGGCTGGT CCTGGACGTC GAGCCGCCGA GCCGGCCGCT GCTGTTCACC 
GCCGCGTTCG CCGTCGGGAC CGCCTCGCTC ATCGCGCTGG GGGTCCTCAT CGCCGCCGTG 
GCGCCCAGCG CGGGCGCGGC CAACGGCCTG TCGATGACGC TGTACATGCT CCTGCTGCTC 
CTGGGCGGGG TCTTCCTGCC GCAGAACGCC CTGCCCGACC TCCTGGTGCG CGCGGGGGAG 
TTCGCGCCGC CCGGCGCCCG GCTCCTGCTG GAGAGCTGGT CGGGCGGAGC CGGGGACGCG 
GGGCTGCCGC AACTCGCCCA ACTGGCGATA ATGGCGGGGA TCGCCGTGGC GGCCGCGGCG 
CTGGCGGCCC GACTGTTCCG ATGGGAGTGA
 
Protein sequence
MSTLLRVTAT EARLLTREPV AVSVGILLPT ALLLGLGALP TLREPSPEFG GLRFVDTWAP 
MALILGMGIL CVQHLPTTLA AYRERGVLRR MSTTPMHPGT LLSAQIIVVS AAAAVSAALL 
VLSSWLVLDV EPPSRPLLFT AAFAVGTASL IALGVLIAAV APSAGAANGL SMTLYMLLLL 
LGGVFLPQNA LPDLLVRAGE FAPPGARLLL ESWSGGAGDA GLPQLAQLAI MAGIAVAAAA 
LAARLFRWE